Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0246 |
Symbol | |
ID | 4672216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 261660 |
End bp | 262421 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639837377 |
Product | extracellular solute-binding protein |
Protein accession | YP_984576 |
Protein GI | 121592680 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.469708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATGT TCAAGACCCT GGCCACTGCT GTGGCGCTGT GCGCCGCCGT TGTCGTGCAG GCGCGTCCCC TGGAAGAAAT CCAGAAGAGC GGCACCATCA TCCTCGGCTC CGAGGGGCAG TACGCGCCGT TCAACTTCTT CAAGGGCAAG CAGCTCACGG GCTACGAGAT CGAAGTGGCC GAGGCCGTGG TCAAGAAGAT GGGCCTGAAG TACGAGTGGA AGACCGTCGG CTTCGACGCG CTGCTGACCG GCCTGGCCCA GGACCGCTGG GACCTGGTGA TCGCCTCGCA CGCCATCACC GACGAGCGCT CCAAGGCCGT GACCTTCACG CTGCCGCACT ACTGCTCGGG CGGCATCATC GTGTCGATGA AGCCCGAGGT GGCCAAGGCC GCCGACCTGA ATGGCAAGGT GGTGGCCGTG CAGACCGGCA CCACCTATCT GGACGCCGTG AAGAAGGTGC CCGGCGTGAA GGACGTGAAG AACTTCCCCA CCGACGAAGC CGCGCGCAAC GCCCTGGCTT CCAAGCGTGT GGACGCCTGG GTGACCGACC GCTTCGTGGC CAAGGAAATG CTGGCCAAGG CGCCCAAGGC GGGCTTCCGC ACGGGCGACA TGCTGTTCGT GGAGCAGGTG GCCGCCGCCG TCTCCAAGGG CAACCAGGGC CTGGCCGACG CCTGGAACAA GGCGCTGAAG GAAGCGATCG CCGACGGCAC TGTGGGCAAG ATCTCCCAGA AGTACTTCCA AGAAGACGTC ACCTGCAAGT AA
|
Protein sequence | MKMFKTLATA VALCAAVVVQ ARPLEEIQKS GTIILGSEGQ YAPFNFFKGK QLTGYEIEVA EAVVKKMGLK YEWKTVGFDA LLTGLAQDRW DLVIASHAIT DERSKAVTFT LPHYCSGGII VSMKPEVAKA ADLNGKVVAV QTGTTYLDAV KKVPGVKDVK NFPTDEAARN ALASKRVDAW VTDRFVAKEM LAKAPKAGFR TGDMLFVEQV AAAVSKGNQG LADAWNKALK EAIADGTVGK ISQKYFQEDV TCK
|
| |