| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0228 |
|---|
| Symbol | |
|---|
| ID | 4672059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 244055 |
|---|
| End bp | 244693 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639837359 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_984558 |
|---|
| Protein GI | 121592662 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAT ACCACACCGT CCCCGTCACC CCGTTCCAGC AGAACTGCTC CCTCGTCTGG
TGCGACCAGA CCCAGGATGC CGCGGTCATC GACCCCGGCG GCGATCTGGA TGTGCTGCTG
GCCGAAGCGC AGCGCCTGGG CCTGCACCTG AAGGCCATCT GGCTCACGCA CGCGCACATC
GACCACGCGG GCGGCACGGG CGAGCTGGCG CAGCGGCTGC ACCTGCCCAT CATCGGCCCG
CACGAGGGCG ACCAGTACTG GATCGACGGC CTGGCGCAGC AAAGCGCCAT GTTCGGCTTT
GCGCCCGCGC AGCCCTTCAC GCCCACGCGC TGGCTGCATG ACGGCGACAC CGTCGCCATT
GGCCATGAGT CTTTGAGCGT GCGCCACTGC CCGGGCCACA CGCCCGGCCA TGTGGTGTTC
CACGCGCCGC AGATCGACCG CGCCTTTGTG GGCGACGTGC TGTTTGCCGG CAGCATCGGC
CGCACCGACT TTCCGGGCGG CAACCACCAG CAGCTGATAG ACAGCATCAC CCAGAGGCTG
TGGCCCATGG GCGACCAGAC GGTGTTCATT CCCGGCCACG GGCCGGAAAG CACCTTCGGA
CGCGAGCGGC GCAGCAACCC CTATGTGGGC AATACCTGA
|
|---|
| Protein sequence | MLQYHTVPVT PFQQNCSLVW CDQTQDAAVI DPGGDLDVLL AEAQRLGLHL KAIWLTHAHI
DHAGGTGELA QRLHLPIIGP HEGDQYWIDG LAQQSAMFGF APAQPFTPTR WLHDGDTVAI
GHESLSVRHC PGHTPGHVVF HAPQIDRAFV GDVLFAGSIG RTDFPGGNHQ QLIDSITQRL
WPMGDQTVFI PGHGPESTFG RERRSNPYVG NT
|
|---|
| |