| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0224 |
|---|
| Symbol | |
|---|
| ID | 4674386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 240899 |
|---|
| End bp | 241927 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639837355 |
|---|
| Product | 4-hydroxy-2-ketovalerate aldolase |
|---|
| Protein accession | YP_984554 |
|---|
| Protein GI | 121592658 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAA AGATCACCCT GCACGACATG ACGCTGCGCG ATGGCATGCA CCCCAAGCGC
CACCTGATGA CGCTGGAGCA GATGAAGTCC GTGGCCCAAG GGCTGGATGC CGCGGGCGTG
CCGCTGATTG AAGTGACCCA CGGCGACGGC CTGGGCGGCG CGTCGGTCAA CTACGGCTTT
CCCGCGCACA GCGACGAGGA ATACCTGGGC ACCGTGATTC CGCTGATGAA GCAGGCCAAG
GTCTCTGCGC TGCTGCTGCC GGGCATTGGC ACCGTCGATC ACCTGAAGAT GGCCCACGGC
CTGGGCGTGC ACACCATCCG TGTGGCCACG CACTGCACCG AGGCCGACGT GAGCGAGCAG
CACATCACCA TGGCGCGCAA GCTGGACATG GACACGGTGG GCTTTCTGAT GATGGCGCAC
ATGAACGACG CGGCCGGTCT GGTCAAGCAG GCCAGGCTGA TGGAAGGCTA TGGCGCCAAC
TGCATTTACG TCACCGATTC GGCCGGCTAC CTGCTGCCCG ATCAGGTGAC CGAGCGCATT
GCCGCCGTGC GCGCCGCCCT GAAGCCCGAG ACCGAGCTGG GCTTTCACTG CCACCACAAC
CTGGCCATGG GCGTGGCCAA CTCCATCGCC GCCATCCAGG CTGGTGCCAA CCGCATTGAC
GCCGCCGCTG CAGGTCTGGG CGCCGGTGCG GGCAACACGC CGCTGGAAGT GCTGGTGGCC
GTGCTCGACC GCATGGGCAT CGATACCGGC GTGGACGTCT GGAAGATCCA GGACGTGGCT
GAAGACCTGG TGGTGCCGCT GATGGACTTC CCCATCCGCA TCGACCGCGA TGCGCTCACG
CTGGGCTACG CCGGCGTGTA CGGCAGCTTC CTGCTGTTTG CCAAGCGCGC CGAAAAGAAA
TACGGCATTC CCGCGCGCGA CCTGCTGGTC GAGCTGGGCC GCCGCGGCAT GGTCGGCGGC
CAGGAAGACA TGATCGAAGA CACCGCCCTC ACCATGGCGC GCGCACGCGG CCTGACCGTC
AACGCCTGA
|
|---|
| Protein sequence | MTQKITLHDM TLRDGMHPKR HLMTLEQMKS VAQGLDAAGV PLIEVTHGDG LGGASVNYGF
PAHSDEEYLG TVIPLMKQAK VSALLLPGIG TVDHLKMAHG LGVHTIRVAT HCTEADVSEQ
HITMARKLDM DTVGFLMMAH MNDAAGLVKQ ARLMEGYGAN CIYVTDSAGY LLPDQVTERI
AAVRAALKPE TELGFHCHHN LAMGVANSIA AIQAGANRID AAAAGLGAGA GNTPLEVLVA
VLDRMGIDTG VDVWKIQDVA EDLVVPLMDF PIRIDRDALT LGYAGVYGSF LLFAKRAEKK
YGIPARDLLV ELGRRGMVGG QEDMIEDTAL TMARARGLTV NA
|
|---|
| |