Gene Ajs_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0186 
Symbol 
ID4671013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp203828 
End bp204874 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content72% 
IMG OID639837318 
Productglycosyl transferase family protein 
Protein accessionYP_984517 
Protein GI121592621 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC TGGCCGCGCC CTGGCTCAGC ATTCTCGTGC CGGTCTACAA CGTGCAGGAC 
TATCTGGACG AGTGCCTCAC GTCGGTGGTG GATCAGATGG CGGCGCTGCC CGACGGCGGC
GCGGGCGTGG AGCTGCTGGT GCTGGACGAC CGGTCCACCG ATGGCTCGCG TGCCCTCATG
GATGCGCTGG CGCGGCGCTG GCCCGGCCGG CTGACCCTGA TGCAGCACGC GGTCAACCAG
GGCCTGAGCG CGGCGCGCAA CACCATGATC GACGCGGCCC GCGGCGAGTA CATCTGGTTC
CTCGATTCCG ACGACAAGCT GCTGCCCGGC GCGCTGGCGG GCCTGCAGGC CGCCGTGCGG
CGCCATGCGC CCGACGCCGT GCTGTGTGAC TTCGCGGTCT GGCGCGAACG CCAGCGGCTT
AAGCACCGGC TGCGCGGCGA GGCGCATCGC CGCACCTTCG CCGGGCCGGC CGGCGGGCCG
TTCCAGGACC GGGCGGAGCT GCTGGCGGGG CTGTTCCTGA CGGGCCAGCT GCACGCCTGG
TCCAAGATCA CGCGGCGCGC GCTATGGGGT GCGGACCTGC GCTTCCCGCC GGGTCGCTAC
TTCGAGGACA TGGCCACCAT GCCCCTGGTG CTGCTGCGCG CGCGCAGCTA CTGCCATGTG
CGCGCGCCCT GGGTGGCCTA CCGCCAGCGC GGCAGCAGCA TCCTGGCCAC CATGACCCTG
CCGAAGGCGT TGGACCAGTC ACGGGCGCTG GGGGACTTAG CCAGAGCCCT GGGTACGGCC
GAGGCAGCGG GAGATCCGCC CGCCAACGCG CGGCTGCATT TTGCGCTGGC CCACCAGTGC
GCGCGCAATC TGGTGGGTGC GGCACGCTTT GTACAGCGGG CAGCGTTGCC CGGGGCCGAG
CGGCAGGCGG CAGCGCGGCA GTTGCGCGCC GACTTCGCCG CGGCCTCACC CCTGCCCGTG
CCGACGCTGC TGCGTGCCTA TGCGCGCCGT GGCTGGTGGC TGCGGGCCGC CAAGTTGTTG
CGTATCTATG GAGTAATGGA TTTATGA
 
Protein sequence
MSALAAPWLS ILVPVYNVQD YLDECLTSVV DQMAALPDGG AGVELLVLDD RSTDGSRALM 
DALARRWPGR LTLMQHAVNQ GLSAARNTMI DAARGEYIWF LDSDDKLLPG ALAGLQAAVR
RHAPDAVLCD FAVWRERQRL KHRLRGEAHR RTFAGPAGGP FQDRAELLAG LFLTGQLHAW
SKITRRALWG ADLRFPPGRY FEDMATMPLV LLRARSYCHV RAPWVAYRQR GSSILATMTL
PKALDQSRAL GDLARALGTA EAAGDPPANA RLHFALAHQC ARNLVGAARF VQRAALPGAE
RQAAARQLRA DFAAASPLPV PTLLRAYARR GWWLRAAKLL RIYGVMDL