Gene Ajs_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0167 
Symbol 
ID4670697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp187474 
End bp188271 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID639837299 
Producthypothetical protein 
Protein accessionYP_984498 
Protein GI121592602 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.830278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGC TGCGCCACCT GACCGGGCAG CACCGCACCA CGGTCACCAA CCGCACGCTG 
GGCCTGCTGC TGGCGTTCAA CGCGGGGGCG ATCAACGCGG GGGGCTTTCT GGTCGTACAC
ATGTACACCT CGCACATGAC GGGCTTCCTT TCGCTGGTGG CCGACAACCT GGTGCTGGGC
AACATGACGC TGGTGCTCAG CGCCATCGGC ACGCTGTGGG CGTTCATGTC GGGCGCGGGC
TCCACGGCCA TCCTCGTCAA TTGGGCGCGC CACCAGCACC TGCGCAGCGG CTTTGCGCTG
CCGCTCTTGC TGGAGGCGGT GCTGATGCTG CTGTTCGGCC TGATGGGGGC CATCACGCTG
GGCTGGCGCA CGCCGTTCGC CGTGCCGCTC ACGGTGCTGC TGCTGGCCTA CATCATGGGG
CTGCAGAACG CGGTGGTGAC CAAGATGTCC TCGGCCCAGA TCCGCACCAC GCACATGACG
GGCATCGTCA CCGACCTCGG CATCGAGATG GGCAAGGCCC TGTACTGGAA CCGCAGCGGG
ACGCCGCGCG AGTCGCAGGT GCATGCCAAC CAGACGCGCC TGCGCATGTT CGCCAGCCTG
CTGGGCATGT TCACCGCCGG CGGCGTGGTC GGCGCGGCGG GCTTCAAGTA CGTGGGCTTC
ATCTGGGTGG TGCCGCTCGC GTCCATCCTG CTGGCGCTGT CGCTGCCCCC CCTCGCCGCC
GACCGCCACC GCCTGGCCCA GTTGTGGCGC GCGCGCCGCG CTCCCGCACC CGCCGAAGAC
GCCCCCGCGC GCCGCTAA
 
Protein sequence
MRLLRHLTGQ HRTTVTNRTL GLLLAFNAGA INAGGFLVVH MYTSHMTGFL SLVADNLVLG 
NMTLVLSAIG TLWAFMSGAG STAILVNWAR HQHLRSGFAL PLLLEAVLML LFGLMGAITL
GWRTPFAVPL TVLLLAYIMG LQNAVVTKMS SAQIRTTHMT GIVTDLGIEM GKALYWNRSG
TPRESQVHAN QTRLRMFASL LGMFTAGGVV GAAGFKYVGF IWVVPLASIL LALSLPPLAA
DRHRLAQLWR ARRAPAPAED APARR