| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0159 |
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| Symbol | |
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| ID | 4670633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 178123 |
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| End bp | 178932 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837291 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_984490 |
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| Protein GI | 121592594 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACG CCGCATCTTC TTCCTCCTCT ACGGCCACCG CCGGCATGGC CGCCCGCCCG
GCCATCGCCC TCATCACCGG CGGCAGCCGG GGACTGGGCC GCAATGCCGC GTTGCACGTG
GCGCGGTCCG GCACCGATGT GATCCTGACC TACCGCAGCC AGGCCGCCGA GGCGCAGGCC
GTCGTCGCAG AGATCGAGGC CCTCGGCCGC CGCGCCGTGG CGCTGCCCCT GGACGTGGCG
GCCAGCGCCA CCTTCACCGC TTTCGCAGGC CAGGTGCGCG ACGTGCTGGC GCGGCACTGG
CAGCGCGAGC GCTTCGACTT CCTCGTGAAC AACGCGGGCG TGGGCGGGTA TGCCAGCTTC
ATGGAAACCA CCGAGGCGCA GTTCGACGAC ATGGTCAACA TCCACCTCAA GGGCGTGTTT
TTCCTCACAC AGAAGCTGCT GCCGCTGATG AACGACGGCG GGCGCATCCT GAACGTGTCG
TCGGGCCTGG CGCGGTTCGC GCTACCGGGC TACGCGGCCT ATGCGGCGAT GAAGGGCGGG
GTGGAGGTGC TGACGCGCTA CCTGGCCAAG GAACTGGGCG CCCGCGGCAT TGCCGTGAAC
GTGGTGGCGC CTGGTGCGAT CGAGACGGAT TTTGGCGGCG GCGCCGTGCG CGACAACGCG
CAGCTCAACG CCTTCATCGC CGGCCAGACC GCGCTGGGGC GCGTGGGCCT GCCGGACGAC
ATCGGTGGCG TGATCGCTGC GCTGCTGCAG CCGGGCACGG GCTGGGTGAA CGCACAGCGC
ATCGAGGCAT CGGGCGGCAT GTTCGTTTGA
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| Protein sequence | MTHAASSSSS TATAGMAARP AIALITGGSR GLGRNAALHV ARSGTDVILT YRSQAAEAQA
VVAEIEALGR RAVALPLDVA ASATFTAFAG QVRDVLARHW QRERFDFLVN NAGVGGYASF
METTEAQFDD MVNIHLKGVF FLTQKLLPLM NDGGRILNVS SGLARFALPG YAAYAAMKGG
VEVLTRYLAK ELGARGIAVN VVAPGAIETD FGGGAVRDNA QLNAFIAGQT ALGRVGLPDD
IGGVIAALLQ PGTGWVNAQR IEASGGMFV
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