Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0154 |
Symbol | |
ID | 4671426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 172308 |
End bp | 173495 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639837286 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_984485 |
Protein GI | 121592589 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAGC CCTTCACCCC CCTGCTCGTC CTGCTGTTTG CGGGGGGCGC CTATGCGCAG GGGGCCTACA CGATCGGGGA GATCAACAGC TACAAGGCCC AGCCCGCCTT CCTGGAGCCC TACAAGAAGG GCATGGAACT GGCGGTCGAG CAGATCAATG CGGCTGGCGG CATCCAGGGC AAGCAACTGC GGCTGGTCAC GCGCGACGAC AACGCCACCC CCGGCGACGC GGTGCGCGCG GCCGAGGAAC TGATCGCGCG CGAGAAGGTG GATGTGCTCA TGGGCAGCTT TCTGTCGCAC GTGGGCCTGG CGCTGACCGA CTTCGCGCAG CAGAAGAAGC GCTTCTTCCT GGCGGCCGAA CCGCTCACCG ACAAGATCGT GTGGGAGCAC GGCAACCGCT ACACCTTCCG CCTGCGCCCC TCCACCTACA TGCAGGTGGC CATGCTGGTG CCCGAAGCCG TGGCGCTGAA GAAAAAGCGC TGGGCCATCG TCTACCCCAA CTACGAGTAC GGCCAGTCGG CCGTGGCCAC CTTCAAGCAA CTGCTCAAGG CCGCGCAGCC GGACGTGGAG TTCGTTGCCG AGCAGGCCAC GCCGCTGGGC AAGGTGGATG CCGGCAGCGT GGCGCAGGCG CTGGAAGACG CCAAGCCCGA TGCGATCTTC AACGTGCTGT TCGCCGCCGA CCTCGCCAAA TTCGTGCGCG AGGGCAACAC GCGCGGGCTG TTCGCGGGCC GCAGCGTGGT GAGCCTGTTG TCGGGCGAGC CGGAATACCT GGACACGCTC AAGAGCGAGA CGCCCGAGGG CTGGATCGTC ACCGGCTACC CCTGGTACGC CATCCAGACG CCCGAGCACA AGGCCTTTCT GGACGCCTAC ATGAAGCGGT TCAAGGACTA CCCGCGCGCG GGCTCGGTGG TGGGCTACAA CGCCGTCCAG TCGGTTGCGG CGGGGCTGGC CAAGGCTGGA TCGGCCGACA CCGAGAAACT CATCACCGCC TTCCGCGGCC TGCAGGTGGC CACGCCGTTC GGTCCCATCA CCTACCGCCC GCAGGACCAC CAATCCACCA TGGGTGCCTA CGTGGGCAAG ACCGCGCTGC GCATGGGCAA GGGGGTGATG GTGGACTTCA CCTACCGCGA CGGCGCCAAG TACCAGCCCA GCGACGCCGA GGTGAAGCGG CTGCGCAAGG ACGAGTGA
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Protein sequence | MHKPFTPLLV LLFAGGAYAQ GAYTIGEINS YKAQPAFLEP YKKGMELAVE QINAAGGIQG KQLRLVTRDD NATPGDAVRA AEELIAREKV DVLMGSFLSH VGLALTDFAQ QKKRFFLAAE PLTDKIVWEH GNRYTFRLRP STYMQVAMLV PEAVALKKKR WAIVYPNYEY GQSAVATFKQ LLKAAQPDVE FVAEQATPLG KVDAGSVAQA LEDAKPDAIF NVLFAADLAK FVREGNTRGL FAGRSVVSLL SGEPEYLDTL KSETPEGWIV TGYPWYAIQT PEHKAFLDAY MKRFKDYPRA GSVVGYNAVQ SVAAGLAKAG SADTEKLITA FRGLQVATPF GPITYRPQDH QSTMGAYVGK TALRMGKGVM VDFTYRDGAK YQPSDAEVKR LRKDE
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