Gene Ajs_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0154 
Symbol 
ID4671426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp172308 
End bp173495 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID639837286 
Productextracellular ligand-binding receptor 
Protein accessionYP_984485 
Protein GI121592589 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGC CCTTCACCCC CCTGCTCGTC CTGCTGTTTG CGGGGGGCGC CTATGCGCAG 
GGGGCCTACA CGATCGGGGA GATCAACAGC TACAAGGCCC AGCCCGCCTT CCTGGAGCCC
TACAAGAAGG GCATGGAACT GGCGGTCGAG CAGATCAATG CGGCTGGCGG CATCCAGGGC
AAGCAACTGC GGCTGGTCAC GCGCGACGAC AACGCCACCC CCGGCGACGC GGTGCGCGCG
GCCGAGGAAC TGATCGCGCG CGAGAAGGTG GATGTGCTCA TGGGCAGCTT TCTGTCGCAC
GTGGGCCTGG CGCTGACCGA CTTCGCGCAG CAGAAGAAGC GCTTCTTCCT GGCGGCCGAA
CCGCTCACCG ACAAGATCGT GTGGGAGCAC GGCAACCGCT ACACCTTCCG CCTGCGCCCC
TCCACCTACA TGCAGGTGGC CATGCTGGTG CCCGAAGCCG TGGCGCTGAA GAAAAAGCGC
TGGGCCATCG TCTACCCCAA CTACGAGTAC GGCCAGTCGG CCGTGGCCAC CTTCAAGCAA
CTGCTCAAGG CCGCGCAGCC GGACGTGGAG TTCGTTGCCG AGCAGGCCAC GCCGCTGGGC
AAGGTGGATG CCGGCAGCGT GGCGCAGGCG CTGGAAGACG CCAAGCCCGA TGCGATCTTC
AACGTGCTGT TCGCCGCCGA CCTCGCCAAA TTCGTGCGCG AGGGCAACAC GCGCGGGCTG
TTCGCGGGCC GCAGCGTGGT GAGCCTGTTG TCGGGCGAGC CGGAATACCT GGACACGCTC
AAGAGCGAGA CGCCCGAGGG CTGGATCGTC ACCGGCTACC CCTGGTACGC CATCCAGACG
CCCGAGCACA AGGCCTTTCT GGACGCCTAC ATGAAGCGGT TCAAGGACTA CCCGCGCGCG
GGCTCGGTGG TGGGCTACAA CGCCGTCCAG TCGGTTGCGG CGGGGCTGGC CAAGGCTGGA
TCGGCCGACA CCGAGAAACT CATCACCGCC TTCCGCGGCC TGCAGGTGGC CACGCCGTTC
GGTCCCATCA CCTACCGCCC GCAGGACCAC CAATCCACCA TGGGTGCCTA CGTGGGCAAG
ACCGCGCTGC GCATGGGCAA GGGGGTGATG GTGGACTTCA CCTACCGCGA CGGCGCCAAG
TACCAGCCCA GCGACGCCGA GGTGAAGCGG CTGCGCAAGG ACGAGTGA
 
Protein sequence
MHKPFTPLLV LLFAGGAYAQ GAYTIGEINS YKAQPAFLEP YKKGMELAVE QINAAGGIQG 
KQLRLVTRDD NATPGDAVRA AEELIAREKV DVLMGSFLSH VGLALTDFAQ QKKRFFLAAE
PLTDKIVWEH GNRYTFRLRP STYMQVAMLV PEAVALKKKR WAIVYPNYEY GQSAVATFKQ
LLKAAQPDVE FVAEQATPLG KVDAGSVAQA LEDAKPDAIF NVLFAADLAK FVREGNTRGL
FAGRSVVSLL SGEPEYLDTL KSETPEGWIV TGYPWYAIQT PEHKAFLDAY MKRFKDYPRA
GSVVGYNAVQ SVAAGLAKAG SADTEKLITA FRGLQVATPF GPITYRPQDH QSTMGAYVGK
TALRMGKGVM VDFTYRDGAK YQPSDAEVKR LRKDE