Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0150 |
Symbol | aroK |
ID | 4672684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 168554 |
End bp | 169090 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639837282 |
Product | shikimate kinase |
Protein accession | YP_984481 |
Protein GI | 121592585 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.999623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACGC GTTGCGCCCT GGTCGGCATG CCGGGCTCGG GCAAATCCAC GGTGGGCCGC CAGCTCGCCC GCCGTCTGGG GCTTCCCTTC GTGGACCTGG ACCAGCGGCT GGAGCAGTGG CTGGGCACCA GCATCCGCGA CTATTTCGAC CAGCATGGCG AAGCGGCCTT TCGCGACCAC GAGGCTGCGC TGCTGGCCGA GCTGGCCGCC CAGCCCGGCG GCATGGTGCT GTCCACCGGC GGCGGCGCCG TGCTGCGCGA GGACAACCGC GCCACGCTGC GCCGCAGCTT TCCCCATGTG ATGTACCTGC GCGCTTCGCC CGACGAGATC TTCAAGCGCA TCAAGCACGA CCGCACGCGT CCCCTGCTGC AGGTGGACGA CCCGCTGGCC CGCCTGCGCG ACCTCTACCG TGCGCGGGAC CCGCTGTACC GCGAGGCCGC GCACTACGTC ATCGAGACCG GCCGGCCCAC GGTGCACACG CTGGTCAACA TAATCATGAT GCAGCTGGAG ATGGCGGCGC CGGGCGACCC GGTGTAG
|
Protein sequence | MQTRCALVGM PGSGKSTVGR QLARRLGLPF VDLDQRLEQW LGTSIRDYFD QHGEAAFRDH EAALLAELAA QPGGMVLSTG GGAVLREDNR ATLRRSFPHV MYLRASPDEI FKRIKHDRTR PLLQVDDPLA RLRDLYRARD PLYREAAHYV IETGRPTVHT LVNIIMMQLE MAAPGDPV
|
| |