Gene Ajs_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0143 
Symbol 
ID4674266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp158429 
End bp159421 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID639837275 
Producthypothetical protein 
Protein accessionYP_984474 
Protein GI121592578 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.627963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCT CCCGCCGCAT TGCCCTGCTG GGCGCCTGCA CCCTGGCCGC CGCCGGCCTG 
CTGCCCGCTG CCGCCATGGC GCAGCCCGAC GCCAACTGGC CTTCCAAGCC CATCAAGTGG
GTCGTGCCCT TCCCTCCGGG CGGCGCCATG GACGTGATTG CCCGCACGCT GGGCGAGAAG
GCCGGCCGCA CGCTGGGCCA GCCCTTCGTG ATCGAGAACC GCCCCGGCGC GGGCGGCAAC
ATCGGCGCCG ACGCCGTGGC CAAGTCACCG GCCGATGGCT ACACCATCAT GATCACGTCC
ATCGGCATGG CCACCAACAA GGCGCTGTAC CCGCGCCTGA GCTACGACCC GGTGAAGGAC
TTCGCGCCCA TCAGCCTGCT GGCCATCGTG CCCAACGTGC TGGTGGTGAA CACCGCCAAG
ACGACCGACA AGTCCGTGGC CGACGTGATC GCCCATGCCA AGCGCGACCC CGGCAAGCTC
ACCTATGCCT CGGCCGGCAA CGGCACCTCC ATTCACCTGG CGGGCGAGGT GTTCGCCTCC
ATGGCCGGGT TGAACCTGCT GCACGTGCCC TACAAGGGCA GCGGCCCGGC CGTGACCGAC
ATGCTGGGCG GCCAGGTGGA CCTGATGTTC GACAGCATCA CCTCGGCGCG CCCGCACATC
CTGTCGGGCA AGCTGCGCGC GCTGGGCGTG ACCAGCGCCA AGCGATCGGC CACGCTGCCG
GGCGTCCCCA CCATCGCCGA GGCCGGCGTG CCGGGCTACG AGGTCTCGCC CTGGTTCGCC
GTGTTCGCGC CCGCGGGCAC GCCGGCGGCC ATCGTGAACA AGATCAACGC CGCGCTGATC
GACGCCATGA AGCAGCCCGA TACCGTGGCC AAGTTCGAGA CCATCGGCGC CGAGCCCATC
GGCACCACGC CGCAGCAGCT GGCCACGCAC CTGGACAAGG AGTTGGCCCG CTGGGGCGCG
CTGATCAAGG AGCGCAACAT CCGCATGGAT TGA
 
Protein sequence
MTFSRRIALL GACTLAAAGL LPAAAMAQPD ANWPSKPIKW VVPFPPGGAM DVIARTLGEK 
AGRTLGQPFV IENRPGAGGN IGADAVAKSP ADGYTIMITS IGMATNKALY PRLSYDPVKD
FAPISLLAIV PNVLVVNTAK TTDKSVADVI AHAKRDPGKL TYASAGNGTS IHLAGEVFAS
MAGLNLLHVP YKGSGPAVTD MLGGQVDLMF DSITSARPHI LSGKLRALGV TSAKRSATLP
GVPTIAEAGV PGYEVSPWFA VFAPAGTPAA IVNKINAALI DAMKQPDTVA KFETIGAEPI
GTTPQQLATH LDKELARWGA LIKERNIRMD