| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0140 |
|---|
| Symbol | |
|---|
| ID | 4674438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 155906 |
|---|
| End bp | 157108 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639837272 |
|---|
| Product | muconate and chloromuconate cycloisomerases |
|---|
| Protein accession | YP_984471 |
|---|
| Protein GI | 121592575 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTT CTCCCTCCGC TTCCGTGCTG CGCATCGAAC GCATCCAGGC GCGCATCCTG
GACATCCCCA CGATCCGCCC GCACAAGCTC TCGTTCGGCG CCATCCAGCG CCAGAGCCCC
GTGATCGTGC AGCTGTGGCT GAGCGATGGC GCCAGCGGCT TCGGCGAGGC CGCGACCATC
GGCGGCCCCT CGTGGAACGA GGAATCGCCC GAGAGCATCC GGCACGCCAT CGACAGCTAC
CTCGCGCCTG CCGTGATCGG CCAGGACGCG GGCCGCTTCG AGCAGTTGCT GCAGCGCATG
GATCTGGCCT GCAAGGGCAA CCGCTTTGCC AAGAGCGCCG TGGAGCAGGC CGCCATCGAC
GCCGTGGCGC GCAGCCTGGG CCTGCCCGTG TGGCAACTGC TGGGCGGCAA GCAGCGCGAG
AGCCTGCCCC TGGCGTGGAC GCTGGCCAGC GGCGACTCCG CCAAGGACAT CGAGGAGGCC
GAGAAGATGC TGGCCGCGCG CCGCCACCGC ATCTTCAAGC TCAAGATCGG CGCGCGCGCG
CCGCAGGACG ACGTGGCGCA CGTGGCACGC ATCGCCCGCG CGCTGGACGG CCGCGCCAGC
ATGACGGTGG ACGTGAACCA GGCCTGGGAC GGCGCCACCG CGCGCCGCTA CCTGCCCGAG
ATGATCGACG CCGGCGTGGG CCTGATCGAG CAGCCCGTGG CCCAGTGGAA CGAAGAGGCG
CTGCGCCAGC TCACCGCCAC GCTGCCCCAC ACCGCGCTGG TGATGGCCGA CGAGACCGTC
TGCACGCCGC AGGACGCGAT GCGCCTGGCG CGCCATAACG CCTGCCACGT GTTCTCGCTC
AAGATCGCCA AGCACGGCGG CCTGCTGCGC ACGCGCGCCG TGGCCGACGT GGCGCGCGCC
GCCGACATCG GCTGGTACGG CGGCACGATG CTGGAGACCT CCGTCGGCAG CGCCGCCTCG
GCCCATGTGT TCGCCACGCT GGGCGGCACG CACCACAACT GCGAGCTGTT CGGCCCGCAG
CTGCTGGTGG ACGACATCGT GGAGCAGCAG ATGGTCCTTT CCGACTTCGC GCTGCAGTTG
CCCGACGGGC CGGGCTTCGG CCTCACCGTG GTGCCCGAGC GGCTCGAGCG CTTCGACCGC
GCGCGCCAGG GCCTCGCGCC CGTGCACGTG GACCTGGGCC GCGCCAGCGC GCAGCCCGCC
TGA
|
|---|
| Protein sequence | MTTSPSASVL RIERIQARIL DIPTIRPHKL SFGAIQRQSP VIVQLWLSDG ASGFGEAATI
GGPSWNEESP ESIRHAIDSY LAPAVIGQDA GRFEQLLQRM DLACKGNRFA KSAVEQAAID
AVARSLGLPV WQLLGGKQRE SLPLAWTLAS GDSAKDIEEA EKMLAARRHR IFKLKIGARA
PQDDVAHVAR IARALDGRAS MTVDVNQAWD GATARRYLPE MIDAGVGLIE QPVAQWNEEA
LRQLTATLPH TALVMADETV CTPQDAMRLA RHNACHVFSL KIAKHGGLLR TRAVADVARA
ADIGWYGGTM LETSVGSAAS AHVFATLGGT HHNCELFGPQ LLVDDIVEQQ MVLSDFALQL
PDGPGFGLTV VPERLERFDR ARQGLAPVHV DLGRASAQPA
|
|---|
| |