Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0120 |
Symbol | |
ID | 4671987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 134415 |
End bp | 135332 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837252 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_984451 |
Protein GI | 121592555 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.260826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGA AGATGGTGCA GGACAAGGTG GTGGTGGTGA CGGGGGCTGG CGGCGGCATC GGGCGCGACA TGGCGCTGGC GCTGGCCGCC GCCGGGGCCA AGGTGGTGGT GAACGACATC GGCACCTCCA CCACGGGCGA AGGCACCGAC GCCGGCCCCG CGCAGAAGGT GGTCGAGGAG ATCAAGGCCG CCGGCGGCCA GGCCGTGGCC AACATGGACA GCGTGGCCGA GGCCGCCGCG GCGGGCCGCA TCATCCAGTG CGCGCTGGAC CACTTCGGCC GTATCGACGG CGTGGTCAAC AACGCGGGCA TCCTGCGCGA CCGGTTCTTC CACAAGATGA GCCTGGACGA GTGGGACGCC GTGCTCAAGG TGCACCTGTA CGGCAGTTAC TACATGAGCC GCGCGGCCGC CAACCATTTC AAGGAGCAGG AGAGCGGCGC CTTCGTGCAC ATGACCTCCA CCTCGGGCCT GATCGGCAAC TTCGGCCAGG CCAACTACAG CGCGGCCAAG CTGGGGCTGG TGGCGCTGTC CAAGTCCATC GCGCTGGACA TGCAGAAGTT CCACGTGCGC TCCAACTGCA TCGCGCCCTT CGCGTGGAGC CGCATGATCG GCTCGATCCC CACCGACACG CCCGAGCAGC AGGCGCGCGT GGCCAAGATC CAGCAGATGA CGCCCAACAA GATCGCCCCG CTGGCCGTGT ACCTGCTGTC GGACCAGGCC CAGGACGTGA ACGCCCAGGT CTTCGCCGTG CGCAACAACG AAATCTTCCT GATGAGCCAG CCGCGCCCCC TGCGCTCGGT GCACCGCAGC GAAGGCTGGA CGCCCGAGTT CATCGCTGAG CACGGCATGC CCGCGCTCAA GGCCTCGTTC GTGCCCATGG AGCGCTCGGG CGACGTGTTC TCCTGGGATC CGGTGTGA
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Protein sequence | MAQKMVQDKV VVVTGAGGGI GRDMALALAA AGAKVVVNDI GTSTTGEGTD AGPAQKVVEE IKAAGGQAVA NMDSVAEAAA AGRIIQCALD HFGRIDGVVN NAGILRDRFF HKMSLDEWDA VLKVHLYGSY YMSRAAANHF KEQESGAFVH MTSTSGLIGN FGQANYSAAK LGLVALSKSI ALDMQKFHVR SNCIAPFAWS RMIGSIPTDT PEQQARVAKI QQMTPNKIAP LAVYLLSDQA QDVNAQVFAV RNNEIFLMSQ PRPLRSVHRS EGWTPEFIAE HGMPALKASF VPMERSGDVF SWDPV
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