| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0109 |
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| Symbol | |
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| ID | 4670631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 122124 |
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| End bp | 122930 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639837241 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_984440 |
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| Protein GI | 121592544 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.233073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGT CCTCCTCCTT CGCTGGCCGC CACGTCTTCG TGGCCGGCGG CACCAGCGGC
ATCAACCTCG GCATCGCCCA GGCGTTTGCA CGCGCGGGCG CCCACGTGGT GGTCATGAGC
CGCTCGCCCG ACAAGGTGCA GCAGGCGGCC GAAGGCCTGC GCGCGCTGGG GGCGCAGGCG
CTGGGCATCA GTGCCGACGT GCGCGACCCC GCTGCGGTGG ACGCTGCGCT GCGCCAGGCG
CATGCGCAGT TCGGTGACAT CGACGTGCTG ATCTCCGGCG CAGCGGGCAA CTTCATCGCG
CCCGCGGCCG ACCTGTCGCC CAACGGCTTC AAGACCGTGA TCGACATCGA CCTGAACGGC
AGCTTCCACG TGCTGCGCCT GGCGTACCCG ATGCTCAAGA AACCGGGCGC CAGCGTCATC
AACATCTCGG CGCCGCAGGG CGTGAACCCC ACCATGTACC AGGTGCATGC CTGCGCGGCC
AAGGCCGGCA TCGACATGAT GACGCGCGTG CTGGCCATGG AATGGGGCGA GGTGGGCGTG
CGCGTGAACG CCATCGCGCC CGGCCCGATC GGTGACACCG AGGGCATGCG GCGCCTGGCG
CCCACGCCCG AGGCATTGGC CAACGCGGTC GCCACCGTGC CGCTGCAGCG CATGGGCACG
CTCGATGACA TTGCGAACAT GGCGCTGTTC CTCTCGTCGC CACAGGCGGG CTACGTGACG
GGCGCCGTCA TCCCGGTGGA CGGCGGATCG TCGCTACGCG GCGGGCGCGA CATGCGCGCG
TCGTACGTGC CGCGGAGCGC GGCATGA
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| Protein sequence | MAESSSFAGR HVFVAGGTSG INLGIAQAFA RAGAHVVVMS RSPDKVQQAA EGLRALGAQA
LGISADVRDP AAVDAALRQA HAQFGDIDVL ISGAAGNFIA PAADLSPNGF KTVIDIDLNG
SFHVLRLAYP MLKKPGASVI NISAPQGVNP TMYQVHACAA KAGIDMMTRV LAMEWGEVGV
RVNAIAPGPI GDTEGMRRLA PTPEALANAV ATVPLQRMGT LDDIANMALF LSSPQAGYVT
GAVIPVDGGS SLRGGRDMRA SYVPRSAA
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