Gene Ajs_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0102 
Symbol 
ID4671435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp114003 
End bp114989 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID639837234 
Producthypothetical protein 
Protein accessionYP_984433 
Protein GI121592537 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.337169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA CCCGGCGCAA GACCCTGGGC CAATGGCTAC CCCTGATCGC CCTGGCCGCC 
ACGTGCGGCG TGGGCGCCGC ACAGGCGCAG GACCATTACC CGAGCAAACC CATCCGCGTC
ATCGTGCCCT ATCCGGCCGG CGGCGGCACA GACATCATTG CCCGACTGAT CGGCACGCAG
CTGTCCCAGC GCCTGGGCCA GGCCGTGGTG GTGGAAAACA AGCCCGGGGC CAGCGGCATC
CTGGGCAACG ACACCGTGGC CAAGGCGCCC GGCGACGGCT ACACGGTGCT CATGGGCATC
ACCACCGTGG TGCAGATCCC GGCGCTGTAC AAGAAGGTGC CCTACAAGCT CAGCGACCTG
GCCCCGGTGT CGCAGGTGGC CAAGTCGGCC GACCTGCTGA TGGTGCCGCG CAGCTCGGGC
GTGACCACGC TGCAGCAGTT CGTGGACAAG GCCAAGGCAG CCCCCGGCAC GCTCAACTTC
GGCAGCTACG GCAACGCCAC CTCGTCGCAC ATGAACGGCG AGCGCTTCAA GCAGAAGGCC
GGCATCGACA TCACGCACAT TCCCTACCAG GGCTCGGGCC CCGAGATGGC GGCCATGCTG
GGCGGGCAAC TGTCGCTGGC CTTCGTGGAC GCCACGGCCG CCTACCCGCA CATCAAGTCG
GACAAGATCA ACATCCTGGC CATCACCGGC GCACAGCGCC ACCCGGCCCT GCCCCAGGTG
CCCACCATGA CCGAAGCCGG TTACCCCGGC CTGGAGGCCA ACGGCTGGTT CGGCATGTTC
GTGCCCGCCG CCACGCCCAA GACCATCGTG GACAAGCTGG GCAGCGAGGT GAGTTCCATC
GTCAAGTCGC CCGAGCTGAA CAAGCGCCTG ACCGAGATGG GCCTGATCCC CGTGGGGTCC
CTGCCCGACG ACTTCAAGGC CCAGATCGAC AAGGACGCTG CCCACTGGAA GGCCGTGGCC
GAGGCCGCCA AGATCTCGAT GGACTGA
 
Protein sequence
MAFTRRKTLG QWLPLIALAA TCGVGAAQAQ DHYPSKPIRV IVPYPAGGGT DIIARLIGTQ 
LSQRLGQAVV VENKPGASGI LGNDTVAKAP GDGYTVLMGI TTVVQIPALY KKVPYKLSDL
APVSQVAKSA DLLMVPRSSG VTTLQQFVDK AKAAPGTLNF GSYGNATSSH MNGERFKQKA
GIDITHIPYQ GSGPEMAAML GGQLSLAFVD ATAAYPHIKS DKINILAITG AQRHPALPQV
PTMTEAGYPG LEANGWFGMF VPAATPKTIV DKLGSEVSSI VKSPELNKRL TEMGLIPVGS
LPDDFKAQID KDAAHWKAVA EAAKISMD