Gene Ajs_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0073 
Symbol 
ID4673143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand+ 
Start bp77302 
End bp77934 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID639837205 
ProductTetR family transcriptional regulator 
Protein accessionYP_984404 
Protein GI121592508 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGT TGCAGCCGCC CCGTCCGTCC TTCAAGGAGC AGATGCTCCG GGCGCGCGAG 
GATGCCATCG TGGAGGCCGC GAGCCGCCTG CTGGGCGAAA AAGGCTTCGA GACCATGACC 
GTGGACGAGG TCGCCGCGGC CGTAGGCATT GCCAAGGCCA GCCTGTACAA ACACTTTGCC 
GGCAAGGACG ACCTGTGCTC GGCCGCCATG GTGCATGTAG TGGAGCGCCT GCAGCGCTTT 
CTGGCGGCGC TGCCGGCCGA ACTGGGCGCC ATGCAGCGCC TGCACGCGCT GCTGTGCTGG 
ACGCTGCAGT TGCAACTGGC CGACGAGGTG CCGCTGCTGC CCAGCCGCAA CTCCGCGCTG 
GCCCAGGCGC TGCGCGCCTG CGACGCCTAC CGGGCATCGA TGCAGGAGGT GCATGCCTGC 
ATCCTCGGCT GGATCGTCGA GGCGCAGGCC CAGGGACAGC TGCGGCGCGA GTTGCCGCCC 
GATGTGATCT TGTGTGCGCT GCTGGCGCGC AATGCCGATC CCATGCTCGG CATGCTGCGC 
GACCGCGGCT ATGCGGACGA GTGCATCATC GACTGGGCCG CGGACACCTG CCTGAGCGGC 
CTGGCGAGCG GCCCCGCCAT GCGGGTGGCC TGA
 
Protein sequence
MNTLQPPRPS FKEQMLRARE DAIVEAASRL LGEKGFETMT VDEVAAAVGI AKASLYKHFA 
GKDDLCSAAM VHVVERLQRF LAALPAELGA MQRLHALLCW TLQLQLADEV PLLPSRNSAL 
AQALRACDAY RASMQEVHAC ILGWIVEAQA QGQLRRELPP DVILCALLAR NADPMLGMLR 
DRGYADECII DWAADTCLSG LASGPAMRVA