Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0057 |
Symbol | |
ID | 4671515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 62141 |
End bp | 63388 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639837189 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_984388 |
Protein GI | 121592492 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CGGCTGCCCT GCAACCCGGC GCGCTGCAGC ACGTGAAGGT GCTGGACCTG TCGCGCGTGC TGGCCGGCCC CTGGGCCGCC CAGACGCTGG GTGACCTGGG CGCCGAGGTC ATCAAGGTGG AGCGCCCCGG CAGCGGCGAC GACACGCGCG CCTGGGGCCC GCCCTACGTG ACCGACCCCG CCGGCCAGCC CACGGGCGAG TCGGCCTACT ACATGTGCAC CAATCGCAAC AAGCAGTCGG TGACCATCGA CTTCATCCGC CCCGAGGGGC AGGAGCTGGT GCGGCGCCTG GCGCAGCAGT GCGACGTGCT GGTGGAGAAC TTCAAGACAG GCGGTCTGGC GCAGTACGGG CTGGACTATG CCTCGCTGAG CGCGCTCAAC CCGCGCCTGG TGTACTGCTC CATCACCGGC TTCGGGCAGA GCGGGCCGTA TGCGCACCGC GCCGGCTACG ACTTCCTGAT CCAGGGCATG GGCGGGCTGA TGAGCGTCAC CGGCCGCCCC GACGGCGAGG ACGGCGGCGG CCCGATGAAG GTGGGCGTGG CGCTCACCAA CATCCTCACC GGCCTGTACG CCAGCACCGC CATCCTGGCC GCGCTGCAGG CGCGCGAGCA CACCGGCCGC GGCCAGCACA TCGACCTGGC GCTGCTGGAC GTGGGCGTGG CGTGCCTGGC CAACCAGGGC ATGAACTACC TGTACGGCGG CAAGGTGCCG CAGCGCATGG GCAACGCCCA CCCCAACACC GTGCCCTACC AGGACTTCCC CACGGCCGAC GGCCACATGA TCCTGGCCGT GGGCAACGAC GGGCAGTTCG CGCGCTTGTG CCACGCCGTG GGCCAGCCCG GCTGGGCGCA GGATGCGCGC TTTGCCACCA ACGCCGCGCG TGTGGCGCAC CGCGACGAAC TGGTGGCGCT GATCCGCGGC GTGACGGTGG GCAAGCCCAC GCGCGACTGG ATCGCGCTGC TGGAGCAGCA CGCCGTGCCG TGCGGGCCCA TCAACACCGT GCGCGAGGTC TTCGAAGATC CGCAGGTGCG CGCGCGTGGC TTGCAGATCC GCATGGAGCA TCCGCGCGCC GGCGCCGTGC CGCTGGTGGC CAGCCCCATG CGCCTGTCGG ACACGCCGGT CACCTATCGC CACACCCCGC CGCAGCTCGG CCAGCACACC GACACCGTGC TGCGCGAACA CTTGGGCCTG GCGCCCGAGG CCATCGATGC GCTGCGCGCG CAGGGGGTGG TGGCATGA
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Protein sequence | MTQPAALQPG ALQHVKVLDL SRVLAGPWAA QTLGDLGAEV IKVERPGSGD DTRAWGPPYV TDPAGQPTGE SAYYMCTNRN KQSVTIDFIR PEGQELVRRL AQQCDVLVEN FKTGGLAQYG LDYASLSALN PRLVYCSITG FGQSGPYAHR AGYDFLIQGM GGLMSVTGRP DGEDGGGPMK VGVALTNILT GLYASTAILA ALQAREHTGR GQHIDLALLD VGVACLANQG MNYLYGGKVP QRMGNAHPNT VPYQDFPTAD GHMILAVGND GQFARLCHAV GQPGWAQDAR FATNAARVAH RDELVALIRG VTVGKPTRDW IALLEQHAVP CGPINTVREV FEDPQVRARG LQIRMEHPRA GAVPLVASPM RLSDTPVTYR HTPPQLGQHT DTVLREHLGL APEAIDALRA QGVVA
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