| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0045 |
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| Symbol | |
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| ID | 4670626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 46167 |
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| End bp | 47324 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639837178 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_984377 |
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| Protein GI | 121592481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.406138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.264074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCC GCCAGTTTGT CCTCCAAGCC GGCCGAGCCG CCGCCCTCGC GGCCGCGCCG
GCCTTCGTGC TCCCGGCCCG TGCGCAGGAC GCGCCAGGCG TGTCCGCCAA GGCCCTCTCG
ATCGGCTGCT CGGCCGCCAT GAGCGGCCCG CTGCTGGGCT TTGGCACCGA CATTCAGCTG
GGCGCGGGCG CTGCTTTCGC GCAGGCCAAC GCGCGCGGCG GTGTGCATGG GCGCACGCTG
CAGCTGCAGA TGGTGGACGA CGCCTATGAC CCCGAGCGCA CGCTGGCCAA CGTCAAGCAG
ATCATCGGCC AGGGCAGCGC ACTGGCGCTG CTGTCGTGCG TGGGCACGCC CAACAACGCG
GCCATCGTGC CGCTGGTGGA AGAGGCCGGT ATTCCCTACG TGGCGCCGAT CACGGGCGCG
TCGTCGCTGC GCAAGAGCAC GCGCAACGTG TTCCATGTGC GCGCCAGCTA CACCGACGAG
GTGCAGCGCC TCATCCAGCG CCTGGCGGGC ATGGGCCTGA AGGGCATCGG CGTGGTGTAC
CTGGACAACG GCTACGGCCG CGAAATGCTG GAGGACGCCA CGCGCGCCCT GGCGGCACTG
AACATGAAGC CCGCCGTGCA GGTGGCCGTG GCCACCGACG GCAAGAACCT GCCGCAGGTG
CTGCAGGCCG TGGCCGCGGC GCGCCCCTCG GCCGTGCTGC TGGCGACCGC GGGCACGGTG
TCCGTGGGCC TGGTGCGCGG CATCAAGAAG GAATCGCCCG GCGTGCTCAT GGCCGGCCTG
AGCGTGACGC TGCCCAGCGC CAGCCTGGGC CAGCTGGGCG AGGACGGCAG CGGCCTCGCG
CTGTCCATGA TCGTGCCCGA CCCCAACCGC GCCAAGCTGC AGCTGGTGCG CGACTACCAG
TCCGCCATGC GCGCGCAGGG CAAGAGCGAG TTCTCGCAAG GCAGCCTGGA GGCTTACGTG
AACGCGCGCG TGCTCATCGA AGGCCTGGAC CGTGCCGGCA AGGACGTAAC CCAGCCCAAG
CTGCGCGCGG CGCTGGCGGG CATCCGCAAC CTGGACCTGG GCGGCTTCGT GGTGGACTAC
AGCGGCCAGG CGCCCTACGT GGGCTCGCGC TTCATCGACC TGGGCGTGCT GGGCAGCACG
GGCCGCTTCA TCGCCTGA
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| Protein sequence | MQRRQFVLQA GRAAALAAAP AFVLPARAQD APGVSAKALS IGCSAAMSGP LLGFGTDIQL
GAGAAFAQAN ARGGVHGRTL QLQMVDDAYD PERTLANVKQ IIGQGSALAL LSCVGTPNNA
AIVPLVEEAG IPYVAPITGA SSLRKSTRNV FHVRASYTDE VQRLIQRLAG MGLKGIGVVY
LDNGYGREML EDATRALAAL NMKPAVQVAV ATDGKNLPQV LQAVAAARPS AVLLATAGTV
SVGLVRGIKK ESPGVLMAGL SVTLPSASLG QLGEDGSGLA LSMIVPDPNR AKLQLVRDYQ
SAMRAQGKSE FSQGSLEAYV NARVLIEGLD RAGKDVTQPK LRAALAGIRN LDLGGFVVDY
SGQAPYVGSR FIDLGVLGST GRFIA
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