Gene Ajs_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0042 
Symbol 
ID4670857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp44043 
End bp44423 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content71% 
IMG OID639837175 
Productcalcium-binding EF-hand-containing protein 
Protein accessionYP_984374 
Protein GI121592478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.352285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.420457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACA CACCGCAACG ACGCACCCTC CCCTCCTTCG ATGCCCGCAG CGTGATGCTG 
TTTGCGGCGC TGACCGTGGG CGGTGCGGCG GCGCAGGCCC AGACGCCCAG CGCCCCCTCC
GCACAACCGC AGTACCAGAC GGGGCCGGGC CCAGCCACAA CGCAGCCCAA AGCGACCTTT
GGCGGCAGCA GCACGGCCAC GCCCAGCGAC AGCAGCGCCA GCGCCAGCGC CTTTGAACGC
GCCGATGCCA ACCGCGACGG CCAGCTGAGC AGCGCCGAGG CGGGCCAGCT ACCCGCCATC
GCCAACCGCT TCCAGGCGCT GGACAAGGAC AAGAACGGCA GTCTGTCCCG CACCGAATTC
GAGGCCGGCA GCCGGTCTTG A
 
Protein sequence
MPHTPQRRTL PSFDARSVML FAALTVGGAA AQAQTPSAPS AQPQYQTGPG PATTQPKATF 
GGSSTATPSD SSASASAFER ADANRDGQLS SAEAGQLPAI ANRFQALDKD KNGSLSRTEF
EAGSRS