| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0037 |
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| Symbol | |
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| ID | 4671433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 38189 |
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| End bp | 38761 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639837170 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_984369 |
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| Protein GI | 121592473 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.357232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.115121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCATGGA ATGGATCAAG GCGCCGGCCG CTCCTAGTCC CCATGATTTC CACGGCCGAG
TCGCGCTACA ACCAGTGGGT GCGCGATCAC TACCGCTTCC TGCTGCGCAG CGCCTGGGCG
CTGACGGGCT CGCGCGCGCT GGCCGAGGAC GTGGTGCAGG ACTGCTTTAC CAGCGCCTGG
CGCCACCGCG ACCAGCTGCG CGACGCCAGC CTGGCGCGCG CCTGGCTGTT CCAGATCATG
CGGCGCCACG CGCTGCGCCA CCTGCTGCCG CAGCAGCCGC TCCAATACAG CGCCGACGAC
CCGGCGCACG ACGTCCCCGC ACCGCCCTCG CCCATCGACG ACCGGCTGGA CGTGGTCAAG
GCGCTGGCCC GCATCGCCCC CATCCACCGC GAGGTGCTGG TGCTGTACTA CTTCGACGAC
ATGTCCACCG CGCAGATGGC CGAGGCGCTG GACATCGCGC CCGGCACGGT GCTGTCGCGC
CTGGCCCGGG CGCGCGATGC ACTCAAGGCC GCGCTCGGCC CGGCGCCGGC TGCCAGCGCC
GGCGTGATCC CCCTGCGAAA GGCCAGCCGA TGA
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| Protein sequence | MAWNGSRRRP LLVPMISTAE SRYNQWVRDH YRFLLRSAWA LTGSRALAED VVQDCFTSAW
RHRDQLRDAS LARAWLFQIM RRHALRHLLP QQPLQYSADD PAHDVPAPPS PIDDRLDVVK
ALARIAPIHR EVLVLYYFDD MSTAQMAEAL DIAPGTVLSR LARARDALKA ALGPAPAASA
GVIPLRKASR
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