Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0009 |
Symbol | |
ID | 4672499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 9306 |
End bp | 10658 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639837142 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_984341 |
Protein GI | 121592445 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.767498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.693161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCCA TTTCCTCTGC CGCACCCGCC CCGTCGGTGC GGCTTCCGTT CTATCGCCAA CTGTATTTCC AGGTGGTGTT CGCCATCATC ATCGGCGTAC TGCTGGGCCA CTTCCAGCCA GAGTACGGCG CGGCGATGAA GCCGTTCGGC GATGCCTTCA TCAAGCTCAT CAAGATGATC ATCGCGCCGG TGATCTTCCT GACCATCGTC ACCGGCATCG CCAGCATGAG CCACCTGAGC GCCGTGGGCC GCGTGTTCGG CAAGGCCATG GCGTACTTCC TCACGTTCTC CACGCTGGCA CTGGTCGTCG GCCTGGTGGT GGCCAACGTG ATGCAGCCCG GCACGGGCAT GCACATCAAC GTGGCCGAGC TGGACCAGAC CGCCGTCAAG GGCTACGTGA GCAAGTCGCA CGAGATGACG CTCACCGGCT TCGCGCTGGA CATCATTCCC AAGACGCTGA TCAGCCCCTT CGTGGGCGAC AACATCCTGC AGGTGCTGCT GGTGGCCGTG CTGTTCGGCG TGTCGCTGGC CATGGTGGGC GACGCCGGCA AGCCCATCCT GGACTTTCTG GACGGCCTGA CCAAACCCGT GTTCAAGCTG GTGAACATCG TCATGAAGGC CGCGCCCATC GGCGCCTTCG GCGCCATGGC GTTCACCATC GGCAAGTTCG GCCTGGGCTC GCTGGTGAAC CTGGCCGAGC TGGTGCTCAC CTTCTACATC ACCTCGGCCG TGTTCGTGCT GGTGGTGCTG GGCGCGGTGG CACGGGCCTG CGGCTTCTCG GTGCTCAAGC TGATCCGCTA CCTGAAGGCC GAGCTGCTGC TGGTGCTGGG CACCTCCTCG TCCGAGTCCG CCCTGCCCTC GCTGATGGAA AAGATGGAGA AGGCCGGCTG TGCTAAGTCC GTGGTGGGCC TGGTGGTGCC CACGGGCTAC TCGTTCAACC TGGACGGCAC CAACATCTAC ATGACGCTGG CCGCGCTCTT CATCGCGCAG GCCACCGACA CGCACCTCAC GCTGGGCCAC CAGATCGCGC TGCTGCTGGT GGCGATGCTG TCGTCCAAGG GCGCGGCCGG CGTGACCGGC GCGGGTTTCA TCACCCTGGC CGCCACCCTG GCAGTGGTGC CCGAGGTGCC GGTGGCCGGC ATGGCGCTGA TCCTGGGCGT GGACCGCTTC ATGAGCGAGT GCCGCTCGCT CACCAACTTC ATCGGCAACG CCGTGGCCAC AGTGGTGGTG TCGCGCTGGG AAAACGCGCT GGATGCCGAC CGCCTGCACC GCGTGCTGGA CGGTGAGGCC GAGTTCCTGC CCGAGCCCGA ACGGGCGGTG GAACCCGTCG TGCTGGCCCG CCACCGGGCC TGA
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Protein sequence | MHAISSAAPA PSVRLPFYRQ LYFQVVFAII IGVLLGHFQP EYGAAMKPFG DAFIKLIKMI IAPVIFLTIV TGIASMSHLS AVGRVFGKAM AYFLTFSTLA LVVGLVVANV MQPGTGMHIN VAELDQTAVK GYVSKSHEMT LTGFALDIIP KTLISPFVGD NILQVLLVAV LFGVSLAMVG DAGKPILDFL DGLTKPVFKL VNIVMKAAPI GAFGAMAFTI GKFGLGSLVN LAELVLTFYI TSAVFVLVVL GAVARACGFS VLKLIRYLKA ELLLVLGTSS SESALPSLME KMEKAGCAKS VVGLVVPTGY SFNLDGTNIY MTLAALFIAQ ATDTHLTLGH QIALLLVAML SSKGAAGVTG AGFITLAATL AVVPEVPVAG MALILGVDRF MSECRSLTNF IGNAVATVVV SRWENALDAD RLHRVLDGEA EFLPEPERAV EPVVLARHRA
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