| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4118 |
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| Symbol | |
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| ID | 4686367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4404522 |
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| End bp | 4405628 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639837130 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_984329 |
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| Protein GI | 121607000 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000107371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0690123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTC TGAAAGCCAC TCAAGATAAG TTTTTAGGCG TGCTGCAATC GGTTGCGGGA
ATCGTGGAAC GCAGGCATAC CTTGCCCATT CTGGCCAACG TGCTGATCCG CAAGACCGGT
GCACAACTGC AGCTCACGAC GAGCGATCTG GAAATCCAGA TTCGCACCAC CGCCGAGCTC
GATGGCGATG AAGGCGACTT CACCACCACG GTCGGCGCGC GCAAGCTGAT CGATGTGCTG
CGCTCCATGC CCAGCGACCA AACCGTGTCG CTCGAATCGG CGCAGAACAA GCTGATTTTG
AAAGGCGGAA AAAGCCGTTT CACGCTGCAA ACCCTGCCGG CCGAGGACTT TCCGCTGGTG
CAGGAGGCGG CCAGCTTTGG CCCGGTGTTC TCGGTGCCGC AAAAGGTGCT GAAGGAACTG
CTCAACCAGG TGTCGTTTGC CATGGCGGTG CATGACATCC GCTACTACCT CAACGGCATC
CTGTTCGTGG CCGAAGGCAA GCAGTTGAGC CTGGTCGCGA CCGACGGTCA CCGGCTGGCG
TTTTCGTCGG CGACGCTCGA TGTCGAAGTG CCCAAGCAGG AAGTGATCCT GCCGCGCAAG
ACGGTGCTGG AAATGCAGCG CCTGCTCAGC GACAAGGAAG GCGCAATCGA GATGCAGTTT
GCCGGCAACC AGGCCAAGTT CAGCTTTGAA GGCATGGAAT TCGTGACCAA GCTGGTCGAA
GGCAAATTCC CCGACTACAA CCGGGTGATC CCGAAGAACC ACAAAAACAT CATCACGCTG
GGCCGTGCCC CCTTGCTGGC CAGCCTGCAG CGCACCGCCA TCCTGACCAG CGAAAAGTTC
AAGGGCGTGC GCTTGAACAT CGAACCCGGC ACCTTGCGCG TGGCCTCGAA CAATGCCGAG
CAGGAAGAAG CGGTCGATGA ACTCGACATC GATTACGACG GCGATGCCAT CGAAATCGGC
TTCAACGTGA CCTACCTGAT CGATGCCCTG AACAACATGA ACCAGGACAT GGTGAAAATC
GAACTGGCGG ACTCCAACAG CTCCGCCCTG CTCACCATTC CCGACAACGC CGCCTTCAAA
TACGTCGTGA TGCCGATGCG AATTTGA
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| Protein sequence | MIVLKATQDK FLGVLQSVAG IVERRHTLPI LANVLIRKTG AQLQLTTSDL EIQIRTTAEL
DGDEGDFTTT VGARKLIDVL RSMPSDQTVS LESAQNKLIL KGGKSRFTLQ TLPAEDFPLV
QEAASFGPVF SVPQKVLKEL LNQVSFAMAV HDIRYYLNGI LFVAEGKQLS LVATDGHRLA
FSSATLDVEV PKQEVILPRK TVLEMQRLLS DKEGAIEMQF AGNQAKFSFE GMEFVTKLVE
GKFPDYNRVI PKNHKNIITL GRAPLLASLQ RTAILTSEKF KGVRLNIEPG TLRVASNNAE
QEEAVDELDI DYDGDAIEIG FNVTYLIDAL NNMNQDMVKI ELADSNSSAL LTIPDNAAFK
YVVMPMRI
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