| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4113 |
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| Symbol | |
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| ID | 4690091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4399442 |
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| End bp | 4401151 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639837125 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_984324 |
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| Protein GI | 121606995 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.731862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.125371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TCCGCCGCAC CATCTTGTGG GTGATTTTTG GTTTTTCCAT GGTCTTGTTA
TGGGACCAGT GGCAGGTCTT CAATGGCCAT AAAGCCACAT TTTTCCCGTC CAGCACACAG
ACGGCCAAAA CAACTGGCTC GACTGCAGTG CCTTCGACCG GCAGTGCCGC GGTGCCATCG
CCTTCCGCCA GCGCCATGCC TGGCTCCCCA GCTGCGGTAC CGGCAGGTGC GCCATTGGCC
ACACCATCCG TCGCCAAAGA GCAGCTGACG GTGAATACCG ATGTACTTTC CCTGACCTTT
GACAGCGAAG GCGGAACGCT GGTTCATACC GCTTTTAACA AATACAAGGA CATGACCCAC
AAGGATCAGG GATTTGTACT GCTGGATCAA AGCACGAACC GTGTCTATGT GGCGCAGACC
GGCCTGATTG CCGGCAGCAA CGGTGGCACT TTCCCCACCC ACAAAACCCT GATGACCGTC
GTTCCGGGCG AGCGCCTCCT CAAGGACGGA CAAAACGAGT TGCAGGTCAA ATTCGAGTCG
GCCGATATGG GTGGTGTGAA GCTGCTCAAA ACCTACACCA TCAAGCGCGG CGCCTATGAC
CTGGCTGTAC GCCACGAGAT CATCAACACC GGCACAACGC CAGTCGCCCC ACAGCTTTAC
CTGCAGCTGG TGCGTGACGG CAACAAGCCG CCTGGTGAAT CATCGTTTTA TTCCACCTTT
ACCGGCCCGG CTATTTACAC CGAAGCCAAG AAATACCAGA AAGTTGAATT CAAGGATATT
GAAAACAACA AGGTGGATGT TGAAAAGCAG GCCACCAATG GCTATGTGGC CATGGTGCAG
CATTATTTTG CGTCGGCCTG GATCTTGCCT GATGGCCTGA AACGTGACCT GTTTTTGCGC
AAGGTGGACA CCAATTTGTA CGCAGTGGGC ATGATCACGC CACTCGACCC GATTGCCCCT
GGTGCAACGA AAACCGTTGA CTCGAAGTTT TTCGTCGGTC CGCAGGAAGA GAAAGTTCTG
GAAGCTCTGG CCCCCGGCCT GGAACTGGTG AAGGACTATG GCTGGCTGAC GATTCTGGCC
AAACCGCTGT ACTGGCTGCT CGACAAGCTG CACAGCTTCA TTCAGAACTG GGGCTGGTCC
ATCGTGGCGC TGGTGCTGCT GCTGAAAATC GCTTTTTACT GGCTGAATGC CAAGGCATAT
GCCAGCATGG CCAAGATGAA GGCCATCAAT CCCAAGATCA CTGAAATGCG TGAGCGCCTG
AAAGACAAGC CGCAGGAAAT GCAGCAGGCG ATGATGAAAA TCTACCGCGA GGAAAAGGTC
AACCCGATGG GCGGCTGCTT CCCGATCATG ATCCAGATTC CGGTGTTCAT TGCGCTGTAC
TGGGTGCTGC TGTCCAGCGT CGAGATGCGG GGTGCGCCGT GGATCTTGTG GATCAGGGAC
TTGTCTTCGC CTGACCCGTA TTTCATCTTG CCGGTCGTGA TGGCATTGAC CACCATGCTG
CAGACGGCGC TCAACCCCGC GCCGCCCGAT CCGATGCAGG CCAAGCTGAT GTGGTTCATG
CCGCTGATTT TCAGCGTCAT GTTCTTCTTC TTCCCGGCCG GCCTGGTGCT GTACTGGATC
ACCAACAACA TCCTGTCGAT TACCCAGCAG TGGGTCATCA ACACCCGGAT GGGCGTACCT
CCGCAGTTCA ACCTGCCGAA GTTCAGATAA
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| Protein sequence | MNDIRRTILW VIFGFSMVLL WDQWQVFNGH KATFFPSSTQ TAKTTGSTAV PSTGSAAVPS
PSASAMPGSP AAVPAGAPLA TPSVAKEQLT VNTDVLSLTF DSEGGTLVHT AFNKYKDMTH
KDQGFVLLDQ STNRVYVAQT GLIAGSNGGT FPTHKTLMTV VPGERLLKDG QNELQVKFES
ADMGGVKLLK TYTIKRGAYD LAVRHEIINT GTTPVAPQLY LQLVRDGNKP PGESSFYSTF
TGPAIYTEAK KYQKVEFKDI ENNKVDVEKQ ATNGYVAMVQ HYFASAWILP DGLKRDLFLR
KVDTNLYAVG MITPLDPIAP GATKTVDSKF FVGPQEEKVL EALAPGLELV KDYGWLTILA
KPLYWLLDKL HSFIQNWGWS IVALVLLLKI AFYWLNAKAY ASMAKMKAIN PKITEMRERL
KDKPQEMQQA MMKIYREEKV NPMGGCFPIM IQIPVFIALY WVLLSSVEMR GAPWILWIRD
LSSPDPYFIL PVVMALTTML QTALNPAPPD PMQAKLMWFM PLIFSVMFFF FPAGLVLYWI
TNNILSITQQ WVINTRMGVP PQFNLPKFR
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