| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4108 |
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| Symbol | |
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| ID | 4686364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4393322 |
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| End bp | 4394314 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639837120 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_984319 |
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| Protein GI | 121606990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.525065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0965302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG ATGCCGCGAA TATTAATGCC GGGCAGGCCC TGAGCCTTGC CAGGAAGACG
TTTGAAATTG AAGCCGGTGC CGTACTGGAC TTGGCGAGCC GGATTGGAGA CGAGTTTGTT
CAAGCCGTCG GGCTGATGTT CGCCTGTCCC GGCCGGGTGG TCGTCATGGG CATGGGAAAA
AGCGGGCATA TCGGCCGCAA GATTGCCGCC ACGCTGGCTT CTACAGGCAC ACCCGCCATG
TTTGTGCATC CGGCTGAAGC CAGTCATGGC GATCTGGGAA TGATCCAGGC GGTCGATGTG
GTGCTCGCCA TTTCCAACAG CGGCGAAAGC GAGGAACTGG TCGCAATTCT TCCTGTTTTA
ATCCGTCTGG GGGTCGCGCT CATCGCCATG ACTGGAGGCG CTCAATCCAC TCTGGCCAAA
CAGGCCCATG TCACGCTCGA TACCAGTGTC GCCAGAGAGG CGTGTCCACT GAATCTGGCG
CCGACGTCCA GTACCACGGC GCAACTGGCA ATGGGCGATG CACTCTCAGT TGCGCTGCTC
GATGCGCGCG GTTTCCGGGA AGAGGATTTT GCCCGTTCGC ATCCTGGTGG TGCGCTTGGC
CGCAAGCTGC TCACGCATGT CAGTGACGTA ATGCGCAGCG GCAATGCCGT GCCGCAAGTG
ATGCCGGAAA CCTCTTTTAC GGAACTCATG CGCGAGATGA GCGCCAAGGG CCTGGGCGCC
TCTGCCGTGG TGGATGGCAA GCAGTGCGTG CTGGGAATTT TTACTGACGG CGACCTGCGC
CGGCTGGTCG AAAAAGGTGT GGACCTGCGC AGCCTCACTG CCGCTGACGT GATGCATGCC
CGTCCGCATA CCGTCAGGAT CAATTCTCTC GCCGTCGAAG CCGTGGCGCT GATGGAACAG
TACCAGATCA ACAGCGTGCT GGTGGTCGAT GAGGCCGGAG CGCTGTGCGG TGCCCTTAAC
ACCAACGACC TGATGCGCGC CAAGGTAATT TGA
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| Protein sequence | MSFDAANINA GQALSLARKT FEIEAGAVLD LASRIGDEFV QAVGLMFACP GRVVVMGMGK
SGHIGRKIAA TLASTGTPAM FVHPAEASHG DLGMIQAVDV VLAISNSGES EELVAILPVL
IRLGVALIAM TGGAQSTLAK QAHVTLDTSV AREACPLNLA PTSSTTAQLA MGDALSVALL
DARGFREEDF ARSHPGGALG RKLLTHVSDV MRSGNAVPQV MPETSFTELM REMSAKGLGA
SAVVDGKQCV LGIFTDGDLR RLVEKGVDLR SLTAADVMHA RPHTVRINSL AVEAVALMEQ
YQINSVLVVD EAGALCGALN TNDLMRAKVI
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