| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4107 |
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| Symbol | |
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| ID | 4690196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4392703 |
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| End bp | 4393320 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639837119 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_984318 |
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| Protein GI | 121606989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0911482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACTCC TTTCCTCTTC AAGGTCAGCG CCTTTCCTGA ATTTTCCACC TGAACTGCTG
TTGCGTGCGC AAAGCGTCAA GGTTGCTTTT TTTGATGTGG ATGGCGTGCT GACCGATGGC
GGGCTGTATT TTTCGGAGTA TCCCGATGGT CATGAACACG CCGGGAGGCT GAATGGTTTC
AGGTCGTCCG GCGAGATCAT CAAACGCTTC AACACACTCG ACGGCCATGG TTTGAAGCTG
CTGCAAAAGG CGGGTATTAC CCCTGTCGTC ATTACCGGCC GTGACAGCTC AGTGCTGCGC
GCGCGGCTTC AGGCGCTGGG CATTACCCAT TCACACTTTG GCACCGAGGA CAAGCGTCCT
GCTGCTGAAC AGACCTTGCA AGCCTTGGGT CTGGACTGGA ATGCTGCGGC AGCGATGGGC
GATGACTGGC CTGATTTGCC AGTCATGAGC CGCTCGGCAT TAAGTTGCGC GCCTGCCAAT
GCGCACCTGG AAGTCAGGGC ACGGGCCCAT CATGTGACAC AAGCTTCCGG TGGTCAGGGC
GCAGCCCGTG AATTTTGTGA TGTGTTGCTT GTCGCCAGCG GGCACTATGC TACGTTGCTG
CGCGAGTACA TCCCATGA
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| Protein sequence | MTLLSSSRSA PFLNFPPELL LRAQSVKVAF FDVDGVLTDG GLYFSEYPDG HEHAGRLNGF
RSSGEIIKRF NTLDGHGLKL LQKAGITPVV ITGRDSSVLR ARLQALGITH SHFGTEDKRP
AAEQTLQALG LDWNAAAAMG DDWPDLPVMS RSALSCAPAN AHLEVRARAH HVTQASGGQG
AAREFCDVLL VASGHYATLL REYIP
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