Gene Pnap_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4105 
Symbol 
ID4687049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4391376 
End bp4391834 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content65% 
IMG OID639837117 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_984316 
Protein GI121606987 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.21043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA AACTATACGT CGGCAACCTG CCTTACTCGG TGCGTGACGA AGACCTGCAA 
CAATCTTTTG GTCAATTCGG CGCTGTCACC AGCGCTAAAG TCATGATGGA ACGCGACACC
GGTCGCTCCA AGGGCTTTGG CTTTGTCGAA ATGGCCAGCG ACGCAGAAGC ACAAGCTGCC
ATCAACGGCA TGAACGGTCA GCCTTTGGGC GGCCGTAGCG TTGTCGTGAA TGAAGCCCGT
CCAATGGAGG CACGTCCTCC ACGTACCGGC GGCTTCGGTG GCGGCGGTGG CGGCTACGGT
GGTGGTGCTG GCGGCGGCGG TGGTGGATAC GGCGGCGGTG GCGGTGGACG CTCTTCCGGC
GGCGGCAGCG ACGGTGGTTT CCGTAGCCCG TACGGCGGCG GCGGCGCTGG TGGCGGACGC
TCCGGTGGCG GCGGCGGTGG TGGACGCGGC GGCTACTAA
 
Protein sequence
MGNKLYVGNL PYSVRDEDLQ QSFGQFGAVT SAKVMMERDT GRSKGFGFVE MASDAEAQAA 
INGMNGQPLG GRSVVVNEAR PMEARPPRTG GFGGGGGGYG GGAGGGGGGY GGGGGGRSSG
GGSDGGFRSP YGGGGAGGGR SGGGGGGGRG GY