Gene Pnap_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4100 
Symbol 
ID4687242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4385742 
End bp4387106 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content67% 
IMG OID639837112 
Productchromate transporter 
Protein accessionYP_984311 
Protein GI121606982 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.343432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC CGGGGCCGGC GGTTGTCTCC TTCCGCGAGG CCTTGCGCTT TTGGCTGCTG 
CTCGGCTTCA TCAGCTTTGG CGGGCCGGCC GGGCAGATTG CCATCATGCA CCGCGAGCTG
GTCGAGCGCC GCCGCTGGGT GTCTGAAAAG CGCTTTTTGC ATGCGCTCAA CTTTTGCATG
GTGCTGCCCG GCCCCGAGGC GCAGCAGCTG GCGACCTACC TGGGCTGGCT GATGCACCGG
AGCTGGGGCG GCGTGGTGGC GGGCAGCCTG TTTTTCCTGC CGTCGCTGGC GCTGCTGATA
GCGCTGAGCT GGATTTACAT GGCCTTTGGC CAGCAGCCGC TGGTGGCCGG GATTTTTTAC
GGCATCAAGC CGGCCGTGGC GGCGATTGTG CTGCACGCGC TGCACCGCAT CGCCAGTAAA
TCATTGGGAA ATCCGCTGCT GGCGCCCGTT CCATGGGCGA TAGCAGCTAT GAGTTTCATA
GCAATTTGGG CCTTGAAGCT GCCGTTTCCG CTGGTCGTGC TGGGCGCCAT GCTGACGGGC
GCCGTTCTGG CGCGCGTGGC GCCTGGCAGC CTGGCGCACG GCAAAGGCCA CGCGGCGGCG
ACGCACGGCG TTCGCGCCGC AGCCCTGATT GACGACGACA CGCCGACGCC GCCGCATGCG
CTGTTCAGCC TGCCCCGGCT GGCATGGGTG CTGCTGGCCG GCGCCGTGCT CTGGCTGGCG
CCGATGGCGG CGCTGTTTTT CACCTACGGC TGGAGCGGCA CGCTGACGCA GGTCGGCTGG
TTTTTCACCA AGGCCGCGCT GCTGACCTTT GGCGGGGCCT ACGCCGTGCT GCCTTACGTG
AACCAGATGG CGGTCGGGCA TTACCACTGG CTCAGCACGG CGCAAATGAT GGACGGCCTG
GCGCTGGGCG AAACCACGCC CGGCCCGCTC ATCATGGTGG TGGCGTTTGT CGGCTTTGTC
GGCGGCTGGG CCAAACAGGT GCTGGGGCCG GATGCGCTGT TTCTGGGCGC GGCCCTGGCC
GCCTGCGTGG CGACGTGGTT CACCTTTTTG CCTTCGTTCA TCTTCATCCT GGCGGGCGGG
CCGTGGGTCG AGTCCACGCG CGGCAACCTC AGGCTGACCG CGCCGCTGGC CGCCGTGACC
GCCGCCGTGG TCGGCGTGAT CGCCAATCTT GCTCTGTTTT TCATAGCTGC TATCGCTTAC
CCATCAAGCG CAAATGGCTT TTTTGATGCT CAACCTGACT GGGTGGCGCT GACGCTGGCG
GTATTGGCGG CCCTGGCCCT GTGGCGCCTG AAGTGGGGCG TGATCCCGGT CATCGCCGCC
TCGGCGGTCG CCGGGCTGCT GCTGCGCTGG TCCGGCCTGG CCTGA
 
Protein sequence
MSAPGPAVVS FREALRFWLL LGFISFGGPA GQIAIMHREL VERRRWVSEK RFLHALNFCM 
VLPGPEAQQL ATYLGWLMHR SWGGVVAGSL FFLPSLALLI ALSWIYMAFG QQPLVAGIFY
GIKPAVAAIV LHALHRIASK SLGNPLLAPV PWAIAAMSFI AIWALKLPFP LVVLGAMLTG
AVLARVAPGS LAHGKGHAAA THGVRAAALI DDDTPTPPHA LFSLPRLAWV LLAGAVLWLA
PMAALFFTYG WSGTLTQVGW FFTKAALLTF GGAYAVLPYV NQMAVGHYHW LSTAQMMDGL
ALGETTPGPL IMVVAFVGFV GGWAKQVLGP DALFLGAALA ACVATWFTFL PSFIFILAGG
PWVESTRGNL RLTAPLAAVT AAVVGVIANL ALFFIAAIAY PSSANGFFDA QPDWVALTLA
VLAALALWRL KWGVIPVIAA SAVAGLLLRW SGLA