| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4097 |
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| Symbol | |
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| ID | 4686721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4382303 |
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| End bp | 4382956 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639837109 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_984308 |
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| Protein GI | 121606979 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.797242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCCGCA GCCTTTTCGA CGAACCGCCA GCGCCCTATG ACGCACCCGA GCCCATCGCG
CCGGGCGCCG TGCTGCTGCG CGGGTTTGCC CTTGACCGGG CCGAAGCACT GCTTCAGGCC
GCGCGGCAGG TCATCGCGGT TGCGCCCTTG CGCCATCTCA TGACGCCGGG CGGGCGCGTC
ATGTCGGTCG AGATGAGCAA TTGCGGCGCG CTGGGCTGGA CATCGAGCCG CACGGGCTAC
CGTTACGACC AAGCCGACCC GCTCTCGGGC CAGCCCTGGC CGCCCATGCC AGCCTGCTTT
GCCGACATGG CGATGCGGGC GGCGGCCGAG GCGGGTTTTG AGGGCTTCGC GCCCGACGCC
TGCCTGATCA ACCGCTACGA ACCCGGCGCG CGCCTGTCGC TGCACCAGGA CCGCGACGAA
AGCGACCTGA GCGCGCCCAT CGTCTCGGTC TCGCTGGGCC TGCCGGCGGT TTTCCTGTTT
GGCGGTTTGC AGCGCAATGA GCGCCCCGCG CGCTTGCGGC TGGCGCACGG TGACGTGGCG
GTGTGGGGCG GCGCGGCGCG GCTGGCGTTT CACGGCGTGG CGCCGCTGGC CGACGGCGAC
CATCCGCGCC TCGGGCGCCA GCGCATCAAC CTGACGTTTC GCCGCGCGGG TTGA
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| Protein sequence | MTRSLFDEPP APYDAPEPIA PGAVLLRGFA LDRAEALLQA ARQVIAVAPL RHLMTPGGRV
MSVEMSNCGA LGWTSSRTGY RYDQADPLSG QPWPPMPACF ADMAMRAAAE AGFEGFAPDA
CLINRYEPGA RLSLHQDRDE SDLSAPIVSV SLGLPAVFLF GGLQRNERPA RLRLAHGDVA
VWGGAARLAF HGVAPLADGD HPRLGRQRIN LTFRRAG
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