Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4080 |
Symbol | |
ID | 4690013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4359966 |
End bp | 4360733 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639837093 |
Product | UbiC transcription regulator-associated domain-containing protein |
Protein accession | YP_984292 |
Protein GI | 121606963 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.515439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGATTC AAGATTTAAC TTCAACACCA CCTGCCGCCA GTGGCGATCA GCCGGCACCG GGTCAGAGCC GCTACGGCTG GCTGGCCAGC GGCTTGCGCG CCCGCATCAC GCAGGGCGAA TGGATTCCGG GCACCGCCTT GCCGCCCGAA GCGCTGCTGG CCAAGGAGCA TGGCGTCGCC CTGGGCACCC TGCGCCAGGC CCTGGCCTTG CTGGTGGCCG AGGGACTGCT GGAGCGCCGC CATGGGCGTG GCACCTTTGT GCGCGCCGGG CTGGGCGGCG CTTCGATGCT GCGCTTTTTC CGTTTCCGCA ACGCTGGCGA ATTGCAGGCA ACGCCCCAGT CAAGCATCCT GGCCCGGTCA GTGGCATTGG CCAGCGTGAA TGAGGCCGAC GCGCTGGGCT TGCCGGCGGG CGCAAGCGTA TTGACGCTGG AGCGGCTGCG CAGCCTGGAC GGCCGGCCTT GCCTGCTCGA ACACATCACG CTGCCGCTGC CGGCCTTTGC CGCGCTGGCA GCTTCTAGCA CCGAGGACTG GGACGATCTT CTGTACCCCA TGTACCAGCG CGTGTGCGGC GTCACGGTGC ACCGTGCGCA AGACCAGCTC AGTTTTGGCC TGCTCAGCGC CGAACAGGCC CGGCGGCTCC AGCTGGAGGC CGGTCACCCT TGCGTGCAGG TCCAGCGGAC GGCATTCGAC CTGGCGGGGC GCTGCATTGA GTTGCGCACC ACGCTGGGCG ATGCGTTTGC CTTCCAGTAC ACGGCGCAAG TCCGTTAA
|
Protein sequence | MLIQDLTSTP PAASGDQPAP GQSRYGWLAS GLRARITQGE WIPGTALPPE ALLAKEHGVA LGTLRQALAL LVAEGLLERR HGRGTFVRAG LGGASMLRFF RFRNAGELQA TPQSSILARS VALASVNEAD ALGLPAGASV LTLERLRSLD GRPCLLEHIT LPLPAFAALA ASSTEDWDDL LYPMYQRVCG VTVHRAQDQL SFGLLSAEQA RRLQLEAGHP CVQVQRTAFD LAGRCIELRT TLGDAFAFQY TAQVR
|
| |