| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4071 |
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| Symbol | |
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| ID | 4687238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4348842 |
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| End bp | 4351172 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639837084 |
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| Product | malic enzyme |
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| Protein accession | YP_984283 |
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| Protein GI | 121606954 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCC CATCCGCTGC GATGCCCCAC GATCTTGATA CCGAGCGCAA CGAAAAGCGC
GCCGAACTGC GCCGCGCCGC GCTGGAATAC CATGAGTTTC CAACCCCCGG CAAGATTGCC
ATTTCCGCCA CCAAGCAGCT GACCAACCAG CGCGATCTGG CGCTGGCCTA TTCGCCCGGC
GTGGCCGCGC CCTGCGAGGA AATCGTCAAG GACCCGAACG CCGCCTTCAA GTACACCAGC
CGGGGCAACC TGGTCGCCGT CATCACCAAC GGCACGGCGG TGCTGGGACT GGGCGACATC
GGCCCGCTGG CTTCCAAGCC GGTCATGGAA GGCAAGGGCG TGCTGTTCAA GAAGTTCGCC
GGCGTCGATG TGTTCGACAT CGAGATCGAC GAGAAAGACC CGGCCAAACT GGTCGAGATC
ATCGCCTCGC TGGAGCCGAC CTTCGGCGCC ATCAACCTCG AAGACATCAA GGCGCCGGAC
TGCTTTTATA TCGAGCGCGA ACTGCGCAAG CGCATGAAGA TTCCGGTCTT TCACGACGAC
CAGCACGGCA CGGCCATCAC CGTCGGCGCG GCCATGCTCA ACGCCCTGAA GGTAGCGGGC
AAGGATCCGA AAAAAGTCAA GCTCGTGACC TCCGGCGCGG GTGCGGCGGC GCTGGCCTGC
CTGGGCCTGC TGCTCAAGCT GGGCATTCCG CGCGAGAACA TCTACGTGAC CGACCTGGCC
GGGGTGGTCT ATGAAGGCCG CACCGAACTG ATGGACGAGG ACAAGATCCA GTTCGCCCAG
CCCACGCAAG CCCGCACGCT GGGCGAAATC ATCGAAGGCG CGGATGTCTT TCTGGGTCTG
TCGGCTGGCG GCGTGCTCAA GAAAGAGATG GTCGCGAAGA TGGCGGCCCA CCCCATCATT
TTTGCGCTGG CCAACCCAAA CCCGGAAATC ACGCCCGAAG ACGTCAAGTC GGTGCGCGAT
GACGCCATCA TCGCCACCGG CCGCAGCGAC TACCCGAACC AGGTCAACAA CGTCCTGTGC
TTTCCGTATA TCTTTCGCGG CGCGCTGGAT GCCGGCGCAT CGACCATCAC CATCGAGATG
GAAATCGCCG CCGTCCACGC CATTGCCGAG TTGGCGCAGG CCGAGCAGAG CGAAGTGGTC
GCCGCCGCCT ACATCGGCGA AAAGCTGACC TTCGGCCCGG AATACCTGAT TCCCAAGCCG
TTTGATCCGC GCCTGATGAT GAAGATTGCA CCGGCCGTGG CCCAGGCCGC CGCCGACAGC
GGCGTGGCGC TGCGGCCCAT CGCCGACATG GACCACTACC GCGAGCGCCT GCAAAGCTTT
GTCTATGCCT CCGGCACGAT CATGAAGCCG ATTTTCACGG CGGCCAAGGT CGCGGCCCGC
AAGCGCGTGG CCTATGCCGA AGGCGAGGAA GAGCGCGTGC TGCGCGCCTG CCAGATCGTG
GTGGACGAAA ACCTGGCCCG GCCGACGCTG ATTGGCCGCC CGGCCATCAT CGCCCAGCGG
ATTGAAAAGT TCGGCCTGCG CCTGAAGGAA GAACTCGACT ACGACGTGGT CAATGTCGAG
CAGGACCACC GCTACCGCGA CTTCTGGCAG ACCTACCACC GCCTGACCGA GCGCAGCGGC
GTGACGGCGC AGATGGCCAA GATCGAAATG CGCCGCCGCC TGACCTTGAT TGCCGGCATG
CTGCTGCTCA AGGGCGATGT GGACGGCCTG ATCTGCGGCA CCTGGGGCAC GACGAGCCAC
CATCTGGCCT ACCTGGACCA GGTCATCGGC AAGCGCGAAG GCGTCAACAC CTATGCCTGC
ATGAACGGGC TGATGCTCCC CGGCCGCCAG GTGTTTTTGC TCGACACCCA CGTCAACTAC
GACCCGACAG CCGAGCAGCT GGCCGAAATC ACCACCATGG CGGCCGAGGA AATGATGCGC
TTCGGCATCA AGCCCAAGGC GGCGCTGCTG TCGCATTCGA ACTTCGGCTC GTCCAACCAC
CCGAGCGCCC TGAAAATGCG CCGCACGCTC GAACTGCTGC GCGAGCAGAC GCCCTGGCTC
GAAGTCGATG GCGAAATGCA CGGCGACGTG GCGCTGGATG CCGAGGGCCG CCGCCTCATC
ATGCCCAACA GCACGCTGAC CGGCGAAGCC AACCTGCTGG TGCTGCCCAA TATTGACGCC
GCCAACATTT CCTACAACCT GCTCAAGACC GCAGCCGGCG GCAACATTGC CATTGGCCCG
GTGCTGCTGG GTGCCAACAA GCCGATGCAC ATCCTGACGC CAACGGCCAC CGTGCGCCGG
ATTGTCAACA TGACGGCACT CACGGTCGCG GACGCCAACG CCGCACGCTA A
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| Protein sequence | MLTPSAAMPH DLDTERNEKR AELRRAALEY HEFPTPGKIA ISATKQLTNQ RDLALAYSPG
VAAPCEEIVK DPNAAFKYTS RGNLVAVITN GTAVLGLGDI GPLASKPVME GKGVLFKKFA
GVDVFDIEID EKDPAKLVEI IASLEPTFGA INLEDIKAPD CFYIERELRK RMKIPVFHDD
QHGTAITVGA AMLNALKVAG KDPKKVKLVT SGAGAAALAC LGLLLKLGIP RENIYVTDLA
GVVYEGRTEL MDEDKIQFAQ PTQARTLGEI IEGADVFLGL SAGGVLKKEM VAKMAAHPII
FALANPNPEI TPEDVKSVRD DAIIATGRSD YPNQVNNVLC FPYIFRGALD AGASTITIEM
EIAAVHAIAE LAQAEQSEVV AAAYIGEKLT FGPEYLIPKP FDPRLMMKIA PAVAQAAADS
GVALRPIADM DHYRERLQSF VYASGTIMKP IFTAAKVAAR KRVAYAEGEE ERVLRACQIV
VDENLARPTL IGRPAIIAQR IEKFGLRLKE ELDYDVVNVE QDHRYRDFWQ TYHRLTERSG
VTAQMAKIEM RRRLTLIAGM LLLKGDVDGL ICGTWGTTSH HLAYLDQVIG KREGVNTYAC
MNGLMLPGRQ VFLLDTHVNY DPTAEQLAEI TTMAAEEMMR FGIKPKAALL SHSNFGSSNH
PSALKMRRTL ELLREQTPWL EVDGEMHGDV ALDAEGRRLI MPNSTLTGEA NLLVLPNIDA
ANISYNLLKT AAGGNIAIGP VLLGANKPMH ILTPTATVRR IVNMTALTVA DANAAR
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