Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4070 |
Symbol | putA |
ID | 4689536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4344490 |
End bp | 4348458 |
Gene Length | 3969 bp |
Protein Length | 1322 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639837083 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_984282 |
Protein GI | 121606953 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGTATG TCGAAAACAT CGAGCGGGGT CAGTTGCCGC AAGGTACAAC CCTGGGTGCA ACCGATGGTA TCCAGAAAAC CGGGCTTGAC GATGCCGGCG AGCCGCTCCT GCCGGTCAAT ACCACGCTTT CTTCTCAGCC CTTCCTGGAC TGGGCGCAAA ACGTCCTGCC GCAGACCAGC TTGCGCGCCG CCGTCACCGC CGCCTGGCAC CGGCCCGAGG AAGAGTGCCT GCCCATGCTG GTGCAACTGG CGCACACCGG CGATGCCGCC CAGCGCGCCG CCATCGAAGA CGTCGCCACC CGGCTCGTGC AAGGCCTGCG CGGCAGACAA GACGCCGGCG GCGTGGAAGC GCTGGTGCAG GAATTCTCGC TCTCCAGCCA GGAAGGCGTG GCGCTGATGT GCCTGGCCGA GGCGCTGCTG CGCATTCCCG ACAACGCCAC GCGCGACGCG CTGATCCGCG ACAAGATCAG CCGTGGCGAC TGGCATGCGC ACCTGGGCAA TTCGCCGTCG ATGTTTGTCA ACGCCGCCGT CTGGGGGCTG ATGCTGACCG GCAAGCTGAC CGCCACCAGC AGCGAAAAAA GCCTGGGCTC GTCGCTGACC CGTCTGATCG GCAAGGGCGG CGAGCCGCTG ATCCGCCAGG GCGTGCACCG CGCCATGAAG CTCATGGGCG AGCAGTTCGT GACCGGCCAG ACCATCTCCG AAGCCCTGGC CAACAGCCGC GCGCTGGAAA AGGCCGGCTT TCGCTATTCC TACGACATGC TGGGCGAAGC CGCCGCGACC GAGCAGGACG CCGAGCGCTA CCTGGCGTCC TACGAGCAGG CCATCCATGC CATCGGCAAG GCGTCGCACG GGCGCGGCAT CCATGAAGGG CCGGGCATTT CGGTCAAGCT GTCGGCGCTG CACCCGCGCT ACAGCCGCGC CCAGCGCGAC CGGGTGATGG GCGAGCTGCT GCCGCGACTG CTCAGGCTCA CGCTGCTGGC GCGCCGCTAC GACATCGGCC TGAACATTGA CGCCGAGGAG GCCGACCGGC TCGAACTCTC GCTCGACCTG CTTGAAAGCC TGTGCTTCGA CCCGGCGCTC AAGGGCTGGA ACGGCATCGG CTTCGTGGTG CAGGCCTACC AGAAGCGCTG CCCCTACGTG ATCGACTACC TGATCGACCT GGCCAGGCGC AGCAGCCACC GACTGATGGT GCGGCTGGTC AAGGGCGCCT ACTGGGACAG CGAGATCAAG CGCGCGCAAG AGGGTGGCCT GGACGGCTAC CCGGTGTTCA CGCGCAAGGT GCACACCGAC GTTTCCTACC TGGCCTGCGC GCGCAAGCTG CTGGCCGCGC CCGACGCTGT TTACCCGCAG TTCGCCACCC ACAATGCGCA GACCGTAGCA AGCATCTACC ACATGGCTGG TGGCAACTAC TACAGCGGCC AGTACGAATT CCAGTGCCTG CACGGCATGG GCGAGCCGCT GTATGAGCAG GTCACGGGCA GTGCCGCCGA CGGCAAGCTG GCCCGCCCCT GCCGCATCTA CGCCCCGGTC GGCACGCACG AGACGCTGCT GGCCTACCTG GTGCGCCGCC TGCTGGAGAA CGGCGCCAAC ACCTCGTTCG TCAACCGCAT CGGCGATGCC AGCGTGCCGG TGGCCGAACT GGTCGTTGAC CCGGTGGCTG ACGTGCGCCA GATCGCGCTT GAAACCGGCC GGCTGGGCGC GCCGCACCCG AAGATCGCGC TGCCGCGCCA GCTGTTTGCC AACCTGGGCG CGCAGTCGCG GCTGAACTCG TCGGGCCTGA ACCTGGCGCA CGAGCAGCAA CTGGCGTCGC TTGCCGCCGG CCTGCTGCGC AGCACCCAGG TCACTTACGC TGCAGCGGCC AGCGTTGCCG ACGTTTCATC CTTCGATCCG GACAAGGCCG TAGCCGACGG CTGGCAGCCT GTCTTGAACC CGGCCGACAC GCGCGACCAG GTCGGCTGGG TGCGCCCGGC CACCGCGCAG GAAGTCGAGC AGGTCGTCAG CCGCGCCGCC AGCGCCGCGC AGATCTGGCA GGGCACGCCG CCGCAGGAGC GCGCCGCCTG CTTGACACGC GCGGCCGACC TGCTGGAGCA GCGCACGCAA AGCCTGCTGG GCCTGATCGT GCGCGAAGCC GGCAAGTCGC TGCCCAACGC GATTGCCGAG GTGCGCGAAG CGGTGGACTT TTTGCGCTAC TACGCCGCCC AGGTCGAGGC GACCTTCGAC AACGACTCGC ACCGCCCGCT CGGTGTGGTG CTGTGCATCA GCCCGTGGAA CTTCCCGCTG GCGATTTTCA CCGGCCAGGT GGCCGCCGCG CTGGCCAGCG GCAACTGCGC GCTGGCCAAG CCGGCCGAGC AGACGCCGCT GGTTGCCGGT GTGATGGTGA ACATCCTGCA CGAAGCCGGC GTGCCGCAGG ATGCCGTGCA GCTGGTGCCC GGCGCGGGTG ATACCGTCGG CGCGGCGCTG GTGGCGCACC GTCAGGTGGC CGGCGTGATG TTCACCGGCT CGACCGAAGT GTCGCGGCTG ATCGCGCAGA CGCTGGCGAA ACGCCTGAGC CCGCAGGGCC GCTGCATCCC GCTGATCGCC GAGACCGGCG GCCAGAACGC GCTGGTGGCC GACTCGTCGG CGCTGGCCGA GCAGCTGGTC GGCGACGTGC TGGCCTCAAG CTTTGATTCG GCCGGCCAGC GCTGCTCGGC GCTGCGCCTG CTGTGCATCC AGGAAGACGG CGCTGAGCGC GTGGTCCATA TGATCAAGGA AGCCATGCGC GAATGGGTCA TGGGCAACCC CGACCGCATG CACACCGATG TCGGCCCGGT GATCGACGAG GACGCGCGCA TCCAGATCGA GCGGCACATT GCCGCCATGC AGGCCGCAGG CCAGAGCGTC ACCCGCATGG CGCGTGACGA AAGCGCCGGC CAGGGCCATT TCGTGATGCC CGCGCTGATC GAGATCGACA GCATCCAGCG CCTCAAGCGC GAGGTCTTCG GCCCGGTGCT GCATGTGCTG CGCTACCGCC GCGAGCAGCT CGGCGAGGTG CTGGACGCGA TCAACGCCAC CGGCTACGGC CTGACCTTCG GCGTGCACAG CCGCATCGAC GAAACCATTG CCCAGGTCAC GCAGAAGGTG CAGGCCGGCA ATATCTACGT CAACCGCAAT GTGATTGGCG CGGTGGTCGG CGTGCAGCCC TTCGGCGGAA TGGGCCTGTC CGGCACCGGC CCCAAGGCGG GCGGCCCGCT CTACCTGTAC CGCCTGCTGC AGGCCGGCCA GTCGCAGGGC AAGCTGGCGC TGGCTGCGCT GCCGGCGATG CCCGTCAGCC GCACGTCCGC GCCCGCCATC GGGCGCGACC CGGCCGATGT GCCCGCGCTG AAGGCGCTGC AAAGCCTGGG CGCTGCATTG CAAGGCCCCC AATTTGCCGC GCTGGCGGGC TGGCAGGGCA GCGGTGACGC CGCACTGGCC GTGGCCGCGT GCGAAGCGTA CCGCGCCAGC AGCGTGCTGG GCCAGCTGTT CACCCTGCCC GGACCCACCG GCGAGTCGAA CCGCTACCAG CTGCTGCCGC GCGGCGCCGT CTGGGCCGCG CCGCAGACCG CGCTCGGCCT GGTGCACCAG GTAGCGGCGG CGCTGGCCAG CGGCAACCCG TGCTGGCTGG AGACGCCTGC GGCCAGCAGC GCCGTGGCGC AGGCGCTGGC CGCGCTGCCG CCCGAGGCGC AGGGCTTTGT CGAGTCACGC ACCACCGCGC AACTGCTGGG CGAGACGCAG CTGAGCGCGA TGCTGTTCGA GGGCGATGGC GACGCGCTGC AGGCCTTGTT GCCGCGCGTC GCGCAGCGCC CCGGCGCCCT CGTGCGGATT GAAAACCTGA CCCCGGCGCA ACTGGCCGAC GGCGCCCTGT ACGACATGAG CGCGCTGATG CATGAGCAAA GCATCAGCAC CAACACCGCC GCAGCCGGCG GCAACGCGCA GCTCATGACG ATGGGCTGA
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Protein sequence | MQYVENIERG QLPQGTTLGA TDGIQKTGLD DAGEPLLPVN TTLSSQPFLD WAQNVLPQTS LRAAVTAAWH RPEEECLPML VQLAHTGDAA QRAAIEDVAT RLVQGLRGRQ DAGGVEALVQ EFSLSSQEGV ALMCLAEALL RIPDNATRDA LIRDKISRGD WHAHLGNSPS MFVNAAVWGL MLTGKLTATS SEKSLGSSLT RLIGKGGEPL IRQGVHRAMK LMGEQFVTGQ TISEALANSR ALEKAGFRYS YDMLGEAAAT EQDAERYLAS YEQAIHAIGK ASHGRGIHEG PGISVKLSAL HPRYSRAQRD RVMGELLPRL LRLTLLARRY DIGLNIDAEE ADRLELSLDL LESLCFDPAL KGWNGIGFVV QAYQKRCPYV IDYLIDLARR SSHRLMVRLV KGAYWDSEIK RAQEGGLDGY PVFTRKVHTD VSYLACARKL LAAPDAVYPQ FATHNAQTVA SIYHMAGGNY YSGQYEFQCL HGMGEPLYEQ VTGSAADGKL ARPCRIYAPV GTHETLLAYL VRRLLENGAN TSFVNRIGDA SVPVAELVVD PVADVRQIAL ETGRLGAPHP KIALPRQLFA NLGAQSRLNS SGLNLAHEQQ LASLAAGLLR STQVTYAAAA SVADVSSFDP DKAVADGWQP VLNPADTRDQ VGWVRPATAQ EVEQVVSRAA SAAQIWQGTP PQERAACLTR AADLLEQRTQ SLLGLIVREA GKSLPNAIAE VREAVDFLRY YAAQVEATFD NDSHRPLGVV LCISPWNFPL AIFTGQVAAA LASGNCALAK PAEQTPLVAG VMVNILHEAG VPQDAVQLVP GAGDTVGAAL VAHRQVAGVM FTGSTEVSRL IAQTLAKRLS PQGRCIPLIA ETGGQNALVA DSSALAEQLV GDVLASSFDS AGQRCSALRL LCIQEDGAER VVHMIKEAMR EWVMGNPDRM HTDVGPVIDE DARIQIERHI AAMQAAGQSV TRMARDESAG QGHFVMPALI EIDSIQRLKR EVFGPVLHVL RYRREQLGEV LDAINATGYG LTFGVHSRID ETIAQVTQKV QAGNIYVNRN VIGAVVGVQP FGGMGLSGTG PKAGGPLYLY RLLQAGQSQG KLALAALPAM PVSRTSAPAI GRDPADVPAL KALQSLGAAL QGPQFAALAG WQGSGDAALA VAACEAYRAS SVLGQLFTLP GPTGESNRYQ LLPRGAVWAA PQTALGLVHQ VAAALASGNP CWLETPAASS AVAQALAALP PEAQGFVESR TTAQLLGETQ LSAMLFEGDG DALQALLPRV AQRPGALVRI ENLTPAQLAD GALYDMSALM HEQSISTNTA AAGGNAQLMT MG
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