| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4063 |
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| Symbol | |
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| ID | 4687828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4337466 |
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| End bp | 4338116 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639837076 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_984275 |
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| Protein GI | 121606946 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATT TTTCCTTGTG GGACATCGTG CGCAACCTCC TGTTGGCCCT GCGCTGGACG
GTGGCGCTGT CGCTGATCGC CTTTGCGGGC GGCGGCATCG TCGGGCTGGT GCTGCTCATT
GCCAGGCTCT CGAAGCTGCC GGGCGCGGCG CGCTGCGTTG CGCTGTATGT GCAGGTGTTT
CAGGGAACGC CGCTGCTGAT GCAGCTGTTC CTGACTTATT TCGGGCTGTC GATGCTGGGG
ATCGATACCT CTGCGCTCTT TGCCGCCTCG GTCTGCCTCA CGCTTTACGC CAGCGCCTAC
CTGACCGAAA TCTGGCGCGG CTGCGTGCTG TCGATTCCAC GCGGCCAGTG GGAAGCGGCG
GCCAGCCTGG CGATGAATTT CGGCGAGCAG CTGCGCCACA TCGTGCTGCC GCAGGCCGCG
CGCATTGCCA TTGGCCCGAC GGTCGGCTTC CTGATCCAGA TCATCAAGGG AACGGCGCTG
GCCTCGGTGA TCGGTTTCGT TGAAATCACC AAGGCCGGCC AGATGATCGC CAACGCCACC
TACGAGCCTT TCCTGGTGTA TGGCTGCGTC GGCCTGATGT ATTTCGCCCT GTGCTTTCCG
CTGTCGGTGT GGAGCCGCAA CCTTGAACGA AAACTCAGCC CCAGGCGCTG A
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| Protein sequence | MVDFSLWDIV RNLLLALRWT VALSLIAFAG GGIVGLVLLI ARLSKLPGAA RCVALYVQVF
QGTPLLMQLF LTYFGLSMLG IDTSALFAAS VCLTLYASAY LTEIWRGCVL SIPRGQWEAA
ASLAMNFGEQ LRHIVLPQAA RIAIGPTVGF LIQIIKGTAL ASVIGFVEIT KAGQMIANAT
YEPFLVYGCV GLMYFALCFP LSVWSRNLER KLSPRR
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