Gene Pnap_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4062 
Symbol 
ID4687424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4336695 
End bp4337453 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID639837075 
ProductABC transporter related 
Protein accessionYP_984274 
Protein GI121606945 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC AAACAAACCC ATCCAAGACC ATTCCCCTGG TGGACATCCG TGGCCTGCGC 
AAGCGCTACG GCACGAACGA AGTCCTCAAG GGCATCGACC TGCAGATAGA GCGCCGCGAG
GTGGTCTGCA TCATCGGCAA GAGCGGCTCG GGCAAGAGCA CGCTGCTGCG CTGCATCAAC
GGCCTGGAGG AGTTCCAGGA AGGCGTGCTC ACGGTGCATG GCCAGGCGCT GAAGATCAAC
GACCCGCACG CCATGCGCGA GTTGCGCCAG AACGTGGGCA TGATCTTCCA GAGCTTCAAC
TTGTTTCCGC ACCTGACGGT CGGTCAGAAC GTGATGCTCG CGCCCATGCT GGTCAAGGCG
CTTCCCAAAG CTGAAGCCCG CCGGCGCGCC GAGCAGCTGC TGGCGCGGGT CGGGCTGGCG
GAAAAGTTTG ACCACCGGCC CGAGCAGCTC TCGGGCGGGC AGCAGCAGCG CGTGGCCATT
GCCCGCGCGC TGGCCATGGA CCCCGAGGTG CTGCTGTGCG ATGAAGTCAC CTCCGCGCTG
GACCCCGAGC TGGTCGGCGA GGTGCTGCAG GTCGTGGAAG ACCTGGCGGA GCAAGGCATG
ACCCTGATGC TGGTGACGCA CGAGATGAAC TTTGCCCGCA AGGTCAGTGA TCGCGTGGTC
TTCATGCACC AGGGAAAAGT TCATGAAATG GGGCCGCCAG AAGCGCTTTT CAGCCGTCCG
AAAACGCCGG AACTGCAGCA ATTCCTGTCG GCCCTGTGA
 
Protein sequence
MTLQTNPSKT IPLVDIRGLR KRYGTNEVLK GIDLQIERRE VVCIIGKSGS GKSTLLRCIN 
GLEEFQEGVL TVHGQALKIN DPHAMRELRQ NVGMIFQSFN LFPHLTVGQN VMLAPMLVKA
LPKAEARRRA EQLLARVGLA EKFDHRPEQL SGGQQQRVAI ARALAMDPEV LLCDEVTSAL
DPELVGEVLQ VVEDLAEQGM TLMLVTHEMN FARKVSDRVV FMHQGKVHEM GPPEALFSRP
KTPELQQFLS AL