Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4062 |
Symbol | |
ID | 4687424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4336695 |
End bp | 4337453 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639837075 |
Product | ABC transporter related |
Protein accession | YP_984274 |
Protein GI | 121606945 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC AAACAAACCC ATCCAAGACC ATTCCCCTGG TGGACATCCG TGGCCTGCGC AAGCGCTACG GCACGAACGA AGTCCTCAAG GGCATCGACC TGCAGATAGA GCGCCGCGAG GTGGTCTGCA TCATCGGCAA GAGCGGCTCG GGCAAGAGCA CGCTGCTGCG CTGCATCAAC GGCCTGGAGG AGTTCCAGGA AGGCGTGCTC ACGGTGCATG GCCAGGCGCT GAAGATCAAC GACCCGCACG CCATGCGCGA GTTGCGCCAG AACGTGGGCA TGATCTTCCA GAGCTTCAAC TTGTTTCCGC ACCTGACGGT CGGTCAGAAC GTGATGCTCG CGCCCATGCT GGTCAAGGCG CTTCCCAAAG CTGAAGCCCG CCGGCGCGCC GAGCAGCTGC TGGCGCGGGT CGGGCTGGCG GAAAAGTTTG ACCACCGGCC CGAGCAGCTC TCGGGCGGGC AGCAGCAGCG CGTGGCCATT GCCCGCGCGC TGGCCATGGA CCCCGAGGTG CTGCTGTGCG ATGAAGTCAC CTCCGCGCTG GACCCCGAGC TGGTCGGCGA GGTGCTGCAG GTCGTGGAAG ACCTGGCGGA GCAAGGCATG ACCCTGATGC TGGTGACGCA CGAGATGAAC TTTGCCCGCA AGGTCAGTGA TCGCGTGGTC TTCATGCACC AGGGAAAAGT TCATGAAATG GGGCCGCCAG AAGCGCTTTT CAGCCGTCCG AAAACGCCGG AACTGCAGCA ATTCCTGTCG GCCCTGTGA
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Protein sequence | MTLQTNPSKT IPLVDIRGLR KRYGTNEVLK GIDLQIERRE VVCIIGKSGS GKSTLLRCIN GLEEFQEGVL TVHGQALKIN DPHAMRELRQ NVGMIFQSFN LFPHLTVGQN VMLAPMLVKA LPKAEARRRA EQLLARVGLA EKFDHRPEQL SGGQQQRVAI ARALAMDPEV LLCDEVTSAL DPELVGEVLQ VVEDLAEQGM TLMLVTHEMN FARKVSDRVV FMHQGKVHEM GPPEALFSRP KTPELQQFLS AL
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