| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4061 |
|---|
| Symbol | |
|---|
| ID | 4688148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4336221 |
|---|
| End bp | 4336658 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639837074 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_984273 |
|---|
| Protein GI | 121606944 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG TTTCAGAAGT CATGACCCGT GGCGCGCGCA GCCTGCGCCC GACCGATACC
GTGGTGCAGG CCGCGCAGGC CATGGAGGAA CTCAATGTGG GCGTGATTCC CGTCTGCGCG
GGCGACAAGC TGATCGGCAT GGTGACCGAC CGCGACATCG TCGTTCGCGG CGTGGCCCAG
GGACTCGATG CCAAGACGAC GACGCTGGCC GACGTGATGA GCAGCCATGT GCGCACCGTG
CGCGAAGACG ATGATGTGGA GGACGTCCTC GACATCATGG GCGAAAACCA GATTCGCCGC
ATGCCGGTGG TGGACGCGCA GGACAGGCTG ATCGGCATCC TTTCCATCGG TGACATTGCC
GCCAAAGACC CGGATGTCGA TATCGATGTG GCCAACTCGC TGGGCAATAT TTCATCGCCC
GCCGAACCGG ACCGCTGA
|
|---|
| Protein sequence | MTTVSEVMTR GARSLRPTDT VVQAAQAMEE LNVGVIPVCA GDKLIGMVTD RDIVVRGVAQ
GLDAKTTTLA DVMSSHVRTV REDDDVEDVL DIMGENQIRR MPVVDAQDRL IGILSIGDIA
AKDPDVDIDV ANSLGNISSP AEPDR
|
|---|
| |