| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4054 |
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| Symbol | |
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| ID | 4687866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4324044 |
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| End bp | 4329314 |
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| Gene Length | 5271 bp |
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| Protein Length | 1756 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837067 |
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| Product | ATPase domain-containing protein |
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| Protein accession | YP_984266 |
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| Protein GI | 121606937 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.892687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCT TCACACCTCA CACCCCTGAT GCAGAGCGCC CGAGCGGGGA CTTTGCCCGC
GAGGTTCTGT ACCAGAGCCA GACCACGCGG ATCTTTCGCA CGCCCCGGCC CACGGGGGCG
GCCAGCGTCA TCTGCAAGGA GCCGCTCGGC GCGAACGCGC TGGAGCGGCT GCACCACGAG
AAGAAAATCA TCACGCGCCT GGCCGGCATC GAGGGCGTGC CGCGACTGGC TGCGCTGCCG
CATCCGGCCG GCATCATGGC GCTGGAAGAT TGCGCGGGCG TGCCGCTGCT GCAGGCCATC
CGCAGCCAGG CGCTGGAACT GCCGGCGCTG CTGGCCGTGG CACTGCAGCT GGCGCGGACC
GTTGCCAGGG TGCACCGCGC AGGCGTGCTG CACCAGAACA TCACCCCGGC CAACATCCTG
CTCGCCGGCC TGCAGCGCCA GCCGGTGCTG ATTGACTTCC ACCTGGCCAC CACCTTTGCC
GAGGGCCAGC CGGGATTCAC CCACCACCGG GACATCCCCG GCACGCTGGC CTATCTGGCG
CCCGAGCAGA CCGGCCGCAC CGGGCGCACG GTGGACCAGC GCGCCGATCT GTATGCGCTG
GGAGCGACGC TCTATGAACT GGCCACCGGC CATCCGCCGT TCGAGAGCGC CGACCCGCTG
CAGCTGATCC ACGACCATCT GGCGCGCCAG CCGGCGCCGC CTGCCGCGCT GGCCCCAGGC
TTGCCGCAAG CGCTGTCGGA CATCGTCTTG CGCCTGCTGG AAAAAGAGCC CGACCGGCGC
TATCAGAGCG CCGAAGGCCT GGCCCATGAC CTGTCCCGGC TCATTGAGCG CCTGGCGCGC
GATGAAAGCG CAGCCTTCTT GCTGGGTGAA CGCGACTTCG CATTGCGACT GGCGGCGCCC
TCGCGGCTGG TCGGGCGCGA GACAGAGATT GACGCGTTGC GGCAGGCTTT CCTGGATACG
CTGCGGGGCA ACAGCCGCGT CGTGCTGGTC GCCGGCGCGC CGGGCGTCGG CAAGACCGCG
CTGATCAACG CGTTGCGGCC GATGGTGACC GCGCAGCGCG GCTGGTTCGT GTCCGGCAAG
TTCGATCAGT ACCGCCGCGA TGCCCCATCG GCCACGGCGC AGGCGCTGCG GGCGCTGGGC
CGCCTGCTGC TGGCCGAACC GGAAGTGGAA CTGACCCATC AGCGCGAACG TATTTTGGCG
GCACTCGGCC CGAATGCCGG CGTGATCTGC TCGCCAAGGC TGCCGGAGTT CGTGACGCTG
CTTGGAGAAC AGCCCACAGT TCCCTTGATT GATCCGGCCC AGACCGAGGC CAGGCTTTTG
CTGACGATCC TGGACCTGCT GCGTTCGATC ATCTCGACCA CGCGGCCGCT GGTGATGGTG
ATCGACGACC TTCAATGGGC CGGCCCGATC TCGATCCATT TCATTGAAGC CGTTCTGGCC
GCGCGGAATC TGCCTGGCCT GCTGCTGGTG GGGGCTTACC GCGAGGCCGC GATAGACGCG
ATTCACCCGA TGTCCGCCGC GCTGCCGCGC TGGGCGCAAC TCGAATGCGC GCCGGTCCGG
CTGCGGCTGT CGGATCTGCC GCCAGCCGAT CTCGGCACAC TGCTGGCGGA AATGCTGCGC
TTGCCGGCGC CACAGGCTGC GGCGCTGGCG CAGGCCTTGA ACGCACACAC CGGCGGCAAC
CCCTTTGACA CGGTGGAGCT GGTCAACGCG CTGCGCCGCG ATGGGGCGCT GGTGCCCGGC
TCGAACGGCT GGGATTGGGA CGCCAGGGTC ATACGTCGCT ACATCGGCCA GGGCAATGTG
GTCGATCTGC TGAGTGCGCG CATTGCCCGG CTGCCCGAGC CGGGGCGCGC GCTGCTCGAA
ACCATGGCAT GCCTGGGCGG CGAAGTCGCC TTAAGCCAGT TGCGCGCCGC CACCGGCCTG
TCGGCCACCG AGCTGGAAGA GCACATGGCA GCGCCGCTTG AAGACGGGCT GCTGGTGTTT
GAGCAAGGCG ACGACAGTGC CCTGCGCTTT CGGCATGACC GCGTGCAGCA GGCGGCCCAT
GGCGCGCGGG AGCCGGCCCA GCGCTGCGCG CTGCATCTGA CCCTCGCGCG GCGGCTGGCG
CTGAAACCGG AGTTCAGTGC GGTGGCGGCG CAGCAGTACC TGCCGGCCAT CGAAGCGCTG
CACGAGCCGG ACGAACGCCG CCGCGCCGCC GGCCTGTTCC ACGAGGCCGC GACCCACGCG
CGCCGCAGCG CCAACTATGC CGCGATGGAA CGCTTCCTGA CGGCTGCGCT AGGGCTGCTC
GGGGGCATGA AGAGCGCGGC GGACGAGCAG CTGTTTGCTT CGCTGGAGAT CGGGCAGCAC
ACCGCGCTCT ACAGCCTGGG GCGTCTTGAG GAGGCCGACG GCATCTACCG TTCCATCGAG
GGCCGCAGCG GTGATGCGCT GGAACTGGTC GAGGCCGCCT GCGTGCAGGT CAGCAGCCTG
ACCAATCGCG GCCGGCCGCG CGAAGCCGTG GCGCTGGGCC TGTCCCTGCT GCGGCAACTC
GGGCTGCAGG TGCCCTCCGG GGATGGCATC GGCATCGAAG TCTCCCGCAA GCTCGATGCC
CTGTACAAAT GGGTGGGCGA AGTGAGTTTG GCCGACGACC AGCGGCGCCC CGAGGCCGCC
GGTCCGCGCG GGGTGGCGGT CGCCACGCTC ATCAACCGCT TGATGGCGCC GTCGCGCCTG
TGCGACCCGA TGGCCATGGC CTGGCTGGTG CTGGAGAGCC AGCGGCTGTG GGCCGAGCAT
GGTCCCTGCG CCAGGCTGGC ACTCAGCCTT GGCCACGCCA CCCTCGTCAC CATTGCGCTG
CGCCAGGAAT ACCGCACCGG CTATGAGGCC GTGCGGCATG TGCTGTCGGT CAGCCAGGCG
CGCGCTTACG AGCCGGAAGC CTCCCAGGTG GCCGACCTCT TCGCACTGAG CACCAGCCAC
TGGTTCGAAC CGCTGGAAAA CAGCGTCGCC CTGATCCAGC GCGCACGCGA AGCCATGCTG
CATGAGGGTG ATCTGCAAAG CGCCTGCTTC ACCTACTACG TATCCGTCAC GGCGCTGCTC
GATTGCGAAC CGACCCTGGA GCGCTACGCC AGCGAGGTCG AAGCCGGCCT GGTCTTTGCC
ATTCGCACCG GCAACGAGCA TGGCACCGAC CTTTACCTCG GCTACCGGCA ACTCCTGCGA
GCGCTGCGCG GCCAGACCCG GGCGACCGGC AGTTTGACCG ACGGCGACTA CGACGAGGCG
GGCCGCGCCG GCCGGCTGGG GGCCAACCCC TCGGCGGATG CCACCTTTCA CCTCATGCGC
GCGCTCGCCG CCGCCTTGTT CGCGGACATG GGCGGGCTGG TGCGGCACAC GGCTGCGCTG
CTGCGCCTGC GCAGCTATCT CCAGAGCTTC TACGCAACGG CGCTGGTGCA CCTGCTGCAG
GCGCTGGCGC TGGCGCAACG GGTCAAGACA GCCGTTCCCG GGGAGCGCGC CGAACTGCTG
CGCGAACTCG ATCTGTGCCG CGACTGGCTG GCACTGCGAG CCACCGATTG CCCGGTCAAT
TTCGGGCACC TGCTCAAGCT GGTCGAAGCC GAGCGCGCCT GGTGCGCGGG CGATCCCTGG
CATGCCGCCC GCGCCTTTGA CACCGCTTTG CGCGAGGCCC AGGCGCGTCA GCGCCCATGG
CACCACGCAC TGATCAGCGA GCGGGCTGGC TTGTTCCATC TGGAGCAAGG GCTGGAGCAC
ACCGGACGGC AACTGCTGGC CGAAGCACGG CAACTCTATA CGGCCTGGGG GGCAAGCGCC
AAGGCGCGCG AGCTTGAGCG CACCCACGCC TTCCTGCGCA TTGCCTACCC TTTGCGGCCC
GGCCCGGACT CGGGCAGCCA TGTGTCCGGC GACAGCATCG ACATGCTTGG CGTACTGCGC
GCGTCCCAGG CGCTGAGTTC GCAAACCAGC CTTGACAGCC TGAAGACCAG CGTGGTCAAG
CTGCTCGGCA CGATGACCGG CGCCACATCG GTGCGCTTCG CGCTGCAGGA TGAGGACCAG
AAGCAATGGC TGCTGTCCGC CACCTCGGAT CAGCAGATGG CGCCGATACC GGTCGAAGAG
GCGGGAGTGC GCGGCCTGTT GCCGCTGTCA GCCTTTCACT ATGCCGAGCG CACCCGCGAG
CCGCTGCTGG TGGAGGACGC GACGCGCGAC GACCGCTTCG CGCGCGACCC ATATCTCGCC
GGACTGGCGC GCTGTTCACT GCTGGTGATC CCGATCCTGA GCCAGGGTGT GCCGCGCGCC
GTGCTGCTGC TGGAAAACCA GCTCAGCCGC GGCGCGTTCA CCACCCACCG GCTGGACGCG
GTGATGCTGA TCGCCGGCCA GCTCGCGGTC TCGCTGGAGA ACGCGCTGCT GTACGAAAAG
CTGGAGCAGC GCGTGCGCGA AAAAACCCGC GAGCTGCGCG AGACCCAGGC CAAACTCATC
GCCGCCGCGC GCCAGGCCGG CATGGCCGAG ATCGCCACCA ACGTGCTGCA CAACGTGGGC
AACATCCTCA ACAGCGTCAA CGTCTCGGCC GGCCTGCTTG GCGGCACGCT GCGCACGTCG
CGCGCCCATG GCTTGTCGCG GGCGGTGCAG CTGATGGACG AGCACGCGGC CGACCTAGGC
GGCTTTCTGA CCCTTGACGG CAAGGGCAAG CTGCTGCCGG GCTATCTGGG CCAGTTGGCG
CTGGCGCTGG CCGCAGAGCA GCAAGGCATG GCCGAGGAAC TCGCCCGCCT CATCCGCAGC
ATCGATCACA TCAAGGACGT GGTGGCCACC CAGCAGTCCT ACGCGGGGAG CGCCAGCATT
GTCGAGCCGC TGCAGATCTG CGATCTGGCC GAGGATGCCC TGCGCATGAG CAGCGAAGCG
CTCGTGCGCC ACCAGGTGAC GGTGGTGAAG GAGTTTGCAC CTGTCCCGGT GCTGCCGCTG
GACCGGGCGC AGGTGCTGCT GATCCTGGTG AACCTGATCA GCAACGCCAA GTACGCCATG
GAAAGCATGG CGGTCGGCTC GCGCCAGATC ACGCTGCAGG TGCAAGCCGC CGGCGGCTTG
CTGCGCGTAT CGGTCGCGGA CCAGGGCGAG GGCATTGCGG CGGAGAACCT CACGCGCATC
TTCGCGCACG GCTTCACCAC GCGCAAGGCC GGCCACGGCT TCGGGCTGCA CAGCTGCGCG
CTGGCCGCCC GGCAGATGGG CGGCACCCTG ACCGCCCACA GCGACGGCCC CGGCCGGGGC
GCGACCTTCA CGCTTGAACT TCCCATCGAC ACGGCGCAGG GCGCGCCATG A
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| Protein sequence | MTPFTPHTPD AERPSGDFAR EVLYQSQTTR IFRTPRPTGA ASVICKEPLG ANALERLHHE
KKIITRLAGI EGVPRLAALP HPAGIMALED CAGVPLLQAI RSQALELPAL LAVALQLART
VARVHRAGVL HQNITPANIL LAGLQRQPVL IDFHLATTFA EGQPGFTHHR DIPGTLAYLA
PEQTGRTGRT VDQRADLYAL GATLYELATG HPPFESADPL QLIHDHLARQ PAPPAALAPG
LPQALSDIVL RLLEKEPDRR YQSAEGLAHD LSRLIERLAR DESAAFLLGE RDFALRLAAP
SRLVGRETEI DALRQAFLDT LRGNSRVVLV AGAPGVGKTA LINALRPMVT AQRGWFVSGK
FDQYRRDAPS ATAQALRALG RLLLAEPEVE LTHQRERILA ALGPNAGVIC SPRLPEFVTL
LGEQPTVPLI DPAQTEARLL LTILDLLRSI ISTTRPLVMV IDDLQWAGPI SIHFIEAVLA
ARNLPGLLLV GAYREAAIDA IHPMSAALPR WAQLECAPVR LRLSDLPPAD LGTLLAEMLR
LPAPQAAALA QALNAHTGGN PFDTVELVNA LRRDGALVPG SNGWDWDARV IRRYIGQGNV
VDLLSARIAR LPEPGRALLE TMACLGGEVA LSQLRAATGL SATELEEHMA APLEDGLLVF
EQGDDSALRF RHDRVQQAAH GAREPAQRCA LHLTLARRLA LKPEFSAVAA QQYLPAIEAL
HEPDERRRAA GLFHEAATHA RRSANYAAME RFLTAALGLL GGMKSAADEQ LFASLEIGQH
TALYSLGRLE EADGIYRSIE GRSGDALELV EAACVQVSSL TNRGRPREAV ALGLSLLRQL
GLQVPSGDGI GIEVSRKLDA LYKWVGEVSL ADDQRRPEAA GPRGVAVATL INRLMAPSRL
CDPMAMAWLV LESQRLWAEH GPCARLALSL GHATLVTIAL RQEYRTGYEA VRHVLSVSQA
RAYEPEASQV ADLFALSTSH WFEPLENSVA LIQRAREAML HEGDLQSACF TYYVSVTALL
DCEPTLERYA SEVEAGLVFA IRTGNEHGTD LYLGYRQLLR ALRGQTRATG SLTDGDYDEA
GRAGRLGANP SADATFHLMR ALAAALFADM GGLVRHTAAL LRLRSYLQSF YATALVHLLQ
ALALAQRVKT AVPGERAELL RELDLCRDWL ALRATDCPVN FGHLLKLVEA ERAWCAGDPW
HAARAFDTAL REAQARQRPW HHALISERAG LFHLEQGLEH TGRQLLAEAR QLYTAWGASA
KARELERTHA FLRIAYPLRP GPDSGSHVSG DSIDMLGVLR ASQALSSQTS LDSLKTSVVK
LLGTMTGATS VRFALQDEDQ KQWLLSATSD QQMAPIPVEE AGVRGLLPLS AFHYAERTRE
PLLVEDATRD DRFARDPYLA GLARCSLLVI PILSQGVPRA VLLLENQLSR GAFTTHRLDA
VMLIAGQLAV SLENALLYEK LEQRVREKTR ELRETQAKLI AAARQAGMAE IATNVLHNVG
NILNSVNVSA GLLGGTLRTS RAHGLSRAVQ LMDEHAADLG GFLTLDGKGK LLPGYLGQLA
LALAAEQQGM AEELARLIRS IDHIKDVVAT QQSYAGSASI VEPLQICDLA EDALRMSSEA
LVRHQVTVVK EFAPVPVLPL DRAQVLLILV NLISNAKYAM ESMAVGSRQI TLQVQAAGGL
LRVSVADQGE GIAAENLTRI FAHGFTTRKA GHGFGLHSCA LAARQMGGTL TAHSDGPGRG
ATFTLELPID TAQGAP
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