Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4047 |
Symbol | |
ID | 4687511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4315215 |
End bp | 4316510 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639837060 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_984259 |
Protein GI | 121606930 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGT TGCAGAACCG GCGTATTTTG CTGATCGACG ACATGCCCTC GCTCCACGAG GACTTCCGCA AGATCCTTGC GCCCAAGCCG GTCGCGCGCG AGCTTGACAG CTTCGAGGCG GCGCTGTTCG GCCAGGCCGA GGCGCCTGCG TGCGACGGCT ACGAGCTGGA CTCGGCCTAC CAGGGGCGCG ACGGCGTGGC CCGGGCCGAG GTGGCCCTCC AGGCCGGCCG GCCCTACGCC ATGGCCTTCG TGGACATGCG CATGCCCCCG GGCTGGGACG GCGTGGAGAC CATCGAGCGG CTCTGGCGCA TCGACCCGCA GGTGCAGGTG GTGATCTGCA CGGCCTACTC CGACCACGCC TGGGAGGACG TTCTGGCGCG CCTGGACGTG CAGGACCGGC TGCTGATCCT GAAAAAGCCG TTCGACATGA TCGAAGTCAG CCAGCTGGCC AGGACGCTGA CGGCCAAGTG GACGCTGGCG CGGCAGGCCA CCTTGCAAAT GAAAACCCTG GAGGAGGCGG TGCAGAACCT CAAGGCGAGC GAAGTGGCCC TGCGCCAATC CAACACGGAA CTCGAAGCCT TCTCATACTC CGTCTCGCAT GATCTGCGCA CGCCGCTGAG CATCATGAAC GCATTCAGCA ATCTGCTGGC CAGGGAACTG GGCGGCCATG CCAGCAAGAA GGTGCTGCAT TACCTGTCGA GAATTCAGGC CAGTGCCGTG GTGGGCGGGC AACTGATCGA AGACCTGCTG TCCCTGGCAC AGGTATCGCG TGCAAAATTG TGCATGGAGC CGGTCGATCT GAGCGACCTC TCGCGCCAGC TCATGGGCGA ATACCGCAGC CAGGCTCCGC AGCGCCAGGC GCTTATCGCG GTTCAGGATG GCTTGCAGGC CCACTGCGAC AAGCGCTTGC TCCGGATCGC CCTGCAGCGC CTGCTGGGCA ACGCATGGAA ATTCACCTCC CTGCGGCCCC ATGCCGAGAT CGCGGTCGGC AGGCTGGACG ACACGGACGG CGAAGCGGTG TTTTTCGTGC GGGACAACGG CAGCGGCTTC GACATGGCTT ACGCCAGCAA GCTTTTTACG ACCTTTCAGC GGATCCATGC GGTCCATGAG TTTCCCGGAA CCGGGGTAGG CCTGGTGACC GCGAGCCGGA TCATCGGCCG GCACGGTGGC CGGGTCTGGG CCGATTCCAG ACCGGGCGAA GGCGCCACGT TTTACTTCAC GATACCGCTG GCCCCCCGGC AAAGCCCGCT TCGGGAAAGC CGGATCGGCT CACCAGACCA CAGGAACCCA CCATGA
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Protein sequence | MNPLQNRRIL LIDDMPSLHE DFRKILAPKP VARELDSFEA ALFGQAEAPA CDGYELDSAY QGRDGVARAE VALQAGRPYA MAFVDMRMPP GWDGVETIER LWRIDPQVQV VICTAYSDHA WEDVLARLDV QDRLLILKKP FDMIEVSQLA RTLTAKWTLA RQATLQMKTL EEAVQNLKAS EVALRQSNTE LEAFSYSVSH DLRTPLSIMN AFSNLLAREL GGHASKKVLH YLSRIQASAV VGGQLIEDLL SLAQVSRAKL CMEPVDLSDL SRQLMGEYRS QAPQRQALIA VQDGLQAHCD KRLLRIALQR LLGNAWKFTS LRPHAEIAVG RLDDTDGEAV FFVRDNGSGF DMAYASKLFT TFQRIHAVHE FPGTGVGLVT ASRIIGRHGG RVWADSRPGE GATFYFTIPL APRQSPLRES RIGSPDHRNP P
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