| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4046 |
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| Symbol | |
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| ID | 4689068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4313707 |
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| End bp | 4315218 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639837059 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_984258 |
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| Protein GI | 121606929 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCGC GTGAAACAGT GGACGCGGCC GAAGCCGCAG CCCATTTGAC GCTTCGCCTG
GCGGCGCTGG AGCGCAGCCT GGCCGCGCGA GACAAAACCA TTCAGGCGCT CGTCACGCGC
GAAAAAGACC GCGCTGGCAA GCGCCATTCA ACCTTCGGGG CGATGGAGGA AAACGCAGTA
CTTCAGCAGG TCGTGACTCA AAAAACGCTT GAACTGGAGG TGCAAAACCG CAAACTCGAA
CAAACCACCA GCGACCTTCG GGAAACCAGC CGCTTGCTCG AAGTGCTGCT GGAAAACACG
CCGGTTTACA TCTACTTCAA GGACGAGCAA TCACGCTTCG TGCACTTCAG CCAATCCCTG
CAGAATGCGG TGCGCGCAGC CGACGCCGCG GCCCTCAAGG GCAAGACCGA TTTTGACTTC
TTTGCTCCCG CCTATGCACG GGAAACTTTT GCCGACGAAC AAGCCATTCT CCAGTCAGGC
GAGCCGATCA TCGGCAAGGC GGAAAAAATG CAGCACGCCG ACGGCCGGAT ATTGTGGACG
CTCACGACAA AAATGCCCTG GCGCAACAAG GATGGGCGCA TCATCGGCAC TTTTGGCGTT
TCCTCGGACC TCACGCTCAT CAAGGCCACG CAAGCCAAAC TGGAACTTGC GCAAACCGAG
TTGCTGGCCG CCGCGCGCCA GGCCGGCATG GCCGAGATCG CCACCAACGT GCTGCACAAC
GTGGGCAACA TCCTCAACAG CGTCAACGTC TCGGCCGACC TGCTCGGCAG CACGCTGCGC
ACCTCGCGCG CCCAGGGGCT GTCGCGGGCG GTGCAGCTGA TGCACGCGCA CGCGGCCGAC
CTGGGTGAAT TTCTGACCCT GGACGACAAG GGCCGGCTGC TGCCGGGCTA CCTGGGCCAG
CTGGCCCTGG CGCTGGCCGC CGAGCAGCAC GGCATGGCCG AGGAGCTCGC GCGCCTCATC
CGCAGCGTCG ATCACATCAA GGACGTGGTG GCCACCCAGC AGTCCTACGC GGGGAGTTCG
AGCATTGTCG AGCCGGTGCA GATCCGCGAC CTGGCCGAGG ATGCCCTGCG CATGAACGAC
GGATCGCTCA CGCGCCATCA GGTCAGCGTG GTCAGGGACT TCGCGCAGAC CCCGGTGCTG
CGGCTGGACC GGGCGCGGGT GCTGCAGATC CTGGTGAACC TGATCAGCAA TGCCAAGCAT
GCGATGGACG GCGTGGCGGA CCGCTCGCAC CGGCTGACCT TGAGCATCCA TGTCGCCGGC
AACGCCGACG GCAGCAAGAA CCTGCGGGTC TGCGTGAGCG ACGAGGGCGA GGGCATCTCG
GCCGACAACC TCACGCGCAT CTTCGCGCAC GGCTTTACCA CGCGCAAGGC CGGCCACGGC
TTCGGGCTGC ACAGCTGCGC GCTGGCCGCC CGGCAGATGG GCGGCACCCT CACGGCCCAC
AGCGAGGGCG CCGGCCGGGG CGCCACCTTC ACGCTTGAAC TTCCGATTGA TACCGCGCAA
GGCGCATCAT GA
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| Protein sequence | MPSRETVDAA EAAAHLTLRL AALERSLAAR DKTIQALVTR EKDRAGKRHS TFGAMEENAV
LQQVVTQKTL ELEVQNRKLE QTTSDLRETS RLLEVLLENT PVYIYFKDEQ SRFVHFSQSL
QNAVRAADAA ALKGKTDFDF FAPAYARETF ADEQAILQSG EPIIGKAEKM QHADGRILWT
LTTKMPWRNK DGRIIGTFGV SSDLTLIKAT QAKLELAQTE LLAAARQAGM AEIATNVLHN
VGNILNSVNV SADLLGSTLR TSRAQGLSRA VQLMHAHAAD LGEFLTLDDK GRLLPGYLGQ
LALALAAEQH GMAEELARLI RSVDHIKDVV ATQQSYAGSS SIVEPVQIRD LAEDALRMND
GSLTRHQVSV VRDFAQTPVL RLDRARVLQI LVNLISNAKH AMDGVADRSH RLTLSIHVAG
NADGSKNLRV CVSDEGEGIS ADNLTRIFAH GFTTRKAGHG FGLHSCALAA RQMGGTLTAH
SEGAGRGATF TLELPIDTAQ GAS
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