| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4043 |
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| Symbol | |
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| ID | 4687714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4309559 |
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| End bp | 4310542 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639837056 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_984255 |
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| Protein GI | 121606926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.187299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGA TTCGTCTGAT ATTCCTCGCC GGGCTGGCCT GCGCTGCGAT GGCGCACGCC
GAGCCGATCA CCTTGACGCT TGCGCATGCC ACCATGACCA CGCACCCGGC TCACCTGGCG
GCGCTGCAGT TTGCCAGGCG GGTCGAAGAG CGCACCAACG GGCAAATCAA GACCGAGATA
TTCCCGGCGG CTCAGCTCGG CAGCGAAAAC GAAATGCTAA AAAAGGTCAA ACTCGGCGCG
ATTGACATGG ACGTGTCCAC GCCGAACTAC ATGATCAAGT ACGAAAAGGC CTTCGCGGTC
GTGGTCATGC CCTACGTATT CGACAACTAC GAGCATGCGC ACCGGGTGCT CGACGGCCCG
GCGATGGCCT GGCTCGCGCC GCTGGCCGAG AAGCAGGGCT TCGTGATCTT GTCCAACTGG
GAATGGGGCT TTCGCAACCT GACCAACAAC CAGCGCCCGA TCAACCAGCC CGGGGATGTG
CGCGGCCTGA AAATACGCGT GCCGCCCGTG GCTGAAGTCG AGACCACCAT GCAGGCGCTG
GGCGCGCAGG TCAGCAAGAT CAGCTTCAAA GACCTCTACG CAGCGTTGTC GCAAGGACGG
GTCGATGGCC AGGAAAACCC GCTCAACGTG ATTTATTACA ACAAGCTGTA CGAGGTGCAG
AAGCACCTCG CGCTGACGCG GCATGTTTAC TACAACACCG TGCACCTGAT CAGCGCCAAA
AGCTGGGCGA TGCTCACGCC GGCGCAGCAA AAAATTGTGC GCGAAGAAAG CAAGGCGGCG
GGCGACGGCA TGCGCAAAAA AATCATTGCC GAAGAGGACG AGCTGATCGC CAAAATGGCC
GCTGCCGGGG TGAAGGTCAC GCGCCCCGAC CTCAAGGCGT TTCGCGCCAC AGTGGAACCC
GTTTATCAGG AAATTGCCGC CTACACGGGC GAAGCGAATG TGCAAAGGTT TCTGAAAATG
GTCGAAGATG AGCGCAAGAA ATGA
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| Protein sequence | MKAIRLIFLA GLACAAMAHA EPITLTLAHA TMTTHPAHLA ALQFARRVEE RTNGQIKTEI
FPAAQLGSEN EMLKKVKLGA IDMDVSTPNY MIKYEKAFAV VVMPYVFDNY EHAHRVLDGP
AMAWLAPLAE KQGFVILSNW EWGFRNLTNN QRPINQPGDV RGLKIRVPPV AEVETTMQAL
GAQVSKISFK DLYAALSQGR VDGQENPLNV IYYNKLYEVQ KHLALTRHVY YNTVHLISAK
SWAMLTPAQQ KIVREESKAA GDGMRKKIIA EEDELIAKMA AAGVKVTRPD LKAFRATVEP
VYQEIAAYTG EANVQRFLKM VEDERKK
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