| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4041 |
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| Symbol | |
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| ID | 4687317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4307485 |
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| End bp | 4308480 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639837054 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_984253 |
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| Protein GI | 121606924 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCA TCCGTTTCAC CCTCATCGCG GCGCTCGCGG CCTTCGCCGC CAGCGCAGTC
GCGGCGCATG CCGGACCAAT CACCCTGACG TTCTCCCATG GCACCCCGAC CACGCACCCG
GAGCATGTGG CGGCGCTGCA GTTTGCCAGG CGTGTCGAAG AGCGCACCCA TGGGCAAATC
AAATTCGCGA TCTTTCCGGC GGGTCAGCTC GGCAGCGAAA ACGAAGTATT GGAGAAAGTC
CGGCTCGGCG CGCTCGACAT GGCCGCGTCC ACGCAGAACT ACCTCATCAA GTACGAAAAG
GCCTTCGCGG TCATCACCAT GCCCTATGTA TTCGACAACT ACGCGCATGC GCACCGGGTG
CTCGACGGCC CGGCGATGGC CTGGCTCGCC CCGCTGGCCA AGAAGCAGGG TTTCGTCATG
CTGTCCAACT GGGAATGGGG CTTTCGCAAC CTGACCAACA ACCAGCGTCC GATCAACCAG
CCCGGGGATG TGCGCGGCCT GAAAATACGC GTGCCACCCG TGCTGGGGCT TGAGGCCACC
ATGCAGGCGC TGGGCGCGCA GATCAGCAAG ATCAGCTTCA AAGACCTCTA CGCAGCGTTG
TCGCAAGGAC GGGTCGATGG CCAGGAAAAC CCGCTCAACG TGATTTATTA CAACAAGCTG
TACGAGGTGC AGAAGCACCT CGCGCTGACG CGGCATGTTT ACTACAACCA GGTTCACCTC
ATGGGCGCCA AAAGCTGGGC CAGGCTCACG CCGGCGCAGC AAACCATCGT GCGCGAAGAA
AGCAAGGCGG CAGGCGACGG CGCGCGCAAG GCCATCATTG CCGAAGAGGA CGAGCTGATC
GCCAAAATGG CCGCTGCCGG GGTGAAGGTC ACACGCCCCG ACCCCCAGCC GTTCCGCGCC
ATGATGGAGC CCGCCCACCA AAAGATCAAA CTCCTTGCCG GCGAAGAGAA CGCACGCAAG
TTCCTGAACA TGGTCGCGGA TGAACGCCGG CCATGA
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| Protein sequence | MQAIRFTLIA ALAAFAASAV AAHAGPITLT FSHGTPTTHP EHVAALQFAR RVEERTHGQI
KFAIFPAGQL GSENEVLEKV RLGALDMAAS TQNYLIKYEK AFAVITMPYV FDNYAHAHRV
LDGPAMAWLA PLAKKQGFVM LSNWEWGFRN LTNNQRPINQ PGDVRGLKIR VPPVLGLEAT
MQALGAQISK ISFKDLYAAL SQGRVDGQEN PLNVIYYNKL YEVQKHLALT RHVYYNQVHL
MGAKSWARLT PAQQTIVREE SKAAGDGARK AIIAEEDELI AKMAAAGVKV TRPDPQPFRA
MMEPAHQKIK LLAGEENARK FLNMVADERR P
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