Gene Pnap_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4031 
Symbol 
ID4687570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4297239 
End bp4297961 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID639837045 
Productdethiobiotin synthase 
Protein accessionYP_984244 
Protein GI121606915 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.677394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTG CTCCTGCGCT GCACGGCTGC TTCATCACCG GCACCGACAC CGACATCGGC 
AAGACCTGCA TCAGCGCGGC GCTGCTGCAC TGGTGCGCGC AGCAAGGCTG GCGCAGCGCG
GGCTTGAAGC CCGTGGCGGC AGGAACAGCG CTCATCGACG GCCAGCGCAT CAACGACGAC
GTGCAGGCCT TGCGCCAGGC CGGCTCCGTG CCGCTCACCG ACGCCGAAGT CGGGCCGCTG
CAGTTCGAGG CCGCCTGCGC GCCGCACATC GCCGCCGCGC TGGAAAACCG CCGGATCGAC
GGCCCCGGGC TGGTCCGGCA CGCGCAGGCG CTGGCCAGTC GCACCGATGT GCTGGTGGTC
GAAGGCGTCG GCGGCTTTTG CGTGCCGCTT GACGACGCAT GGGACACGGC CGACCTGGCA
GTCGCCCTGG GGCTGCCGGT CATCCTGGTG GTCGGGCTTC GGCTGGGGTG CATCAACCAC
GCCCTGCTGA CGGCCGAAGC GATTCAAAGC CGGGGCCTTG CGCTGGCGGG CTGGATTGCC
AATACCATTG ATCCGTCGAT GGCGCACAGC GAAGGCAACC TGGCCAGCCT GCGCCATGAA
CTGATGCGCC GCCACCAGGC GCCGTGCCTG GGCGTGGTTC CCCGGCTGGC CGTGCCCGGG
CCGGCGTATA TTGCCGCTCA TCTGGACAGC GCCGCGCTGG CCAAGCTGCT CAGCCCCCGC
TGA
 
Protein sequence
MTLAPALHGC FITGTDTDIG KTCISAALLH WCAQQGWRSA GLKPVAAGTA LIDGQRINDD 
VQALRQAGSV PLTDAEVGPL QFEAACAPHI AAALENRRID GPGLVRHAQA LASRTDVLVV
EGVGGFCVPL DDAWDTADLA VALGLPVILV VGLRLGCINH ALLTAEAIQS RGLALAGWIA
NTIDPSMAHS EGNLASLRHE LMRRHQAPCL GVVPRLAVPG PAYIAAHLDS AALAKLLSPR