Gene Pnap_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4027 
Symbol 
ID4687820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4293501 
End bp4293986 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID639837041 
Productcalcium/calmodulin dependent protein kinase II association-domain-containing protein 
Protein accessionYP_984240 
Protein GI121606911 
COG category[S] Function unknown 
COG ID[COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.881449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATC CCTATGTTCT GTCAGCAGTG CTCGCCGCCG TTCTTTCAGG TTGCGCGTCA 
GCCCCATCCG GGTCTGAAAC CGCGCCAGCA CGAACAGAGG TTTGCAGGGC AAGCAATGAG
CAGGAAATCG CGGCTTTGTT TGACCGATGG AATCGGTCGC TGCAAACCGG CGATCCGCAC
CAGGTTGTCG CCAACTACGC CGACCGCTCC ATCCTGCTTC CGACCGTATC GAACCAGCCG
CGACTCACGG CGGCCGAGAA GGAGGACTAT TTCCATCACT TCCTCGAAAA CAAGCCCGTC
GGCAAGATCG ATTCAAGAAC CATCGAGATG GGCTGCAACA CCGCGGTCGA TGCCGGACTT
TATACCTTCA CCTTTGGCGC CACGGGTGCT CAAGTCAAGG CTCGCTACAC CTACACCTAC
AGGTGGGACG GAAAGCAGTG GTTGATCACA AGTCACCACT CTTCCGCAAT GCCGGAGAAG
AACTGA
 
Protein sequence
MRNPYVLSAV LAAVLSGCAS APSGSETAPA RTEVCRASNE QEIAALFDRW NRSLQTGDPH 
QVVANYADRS ILLPTVSNQP RLTAAEKEDY FHHFLENKPV GKIDSRTIEM GCNTAVDAGL
YTFTFGATGA QVKARYTYTY RWDGKQWLIT SHHSSAMPEK N