| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4014 |
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| Symbol | |
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| ID | 4689981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4278440 |
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| End bp | 4281310 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639837028 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_984227 |
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| Protein GI | 121606898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.893958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA CCCACGCCAT CATTGCCGGG GCCCTGTTGG CGACCGCCGT CATGCTCGCC
GGCGGCGCCA GCGCCCAGAC CGTCGTCAAC GGCCAGGCCA GCTTTCAGCA GATTGGCAAT
GTCCGCACCA TCACCAACAC GCCCGGCACC ATCATCCAGT GGCCCGGCTT CTCGATTGGG
GCGGGCGAGG TTACCCGCTT CGTCCAGCAA AACGCTGCGA GCGCGGTGCT CAACCGCATC
ACCGGACAGG AGCCGTCCTT GATCCTGGGC GCCTTGCAGT CGAACGGCCG GGTTTTCCTG
GTCAACCCGA ACGGCGTGCT GTTCGGCGCC GGTTCGCGGG TGGACGTGAA CGGGCTGGTG
GCTTCGAGCC TGACGATTTC CAACAGTGAT TTCCTGGCCG GCAAGATGAA CTTCAGCGCT
GGCGCCGTGG CGGGCCATGT TGTCAACCAG GGGAGCATTT CAACGCCCGG AGGCGGCCAG
GTGATCCTGA TTGCGCCGCA AGTCGGGAAC AGCGGCCTCA TCCATTCGCC CGGCGGCGAG
GTCGTGCTGG CCGCAGGCCG CAGCGTGAAG CTGGCCGACA GCCAGAACCC GGCCCTGCAT
GTGGTGGTCA GCGCGCCGCA GGACCAGGCC GTCAACCTGG GCCAGATCGT GGCGCAAAGC
GGCCGCATCG GCATCTTCGG CAACCTGGTC AACCAGCGCG GCCTGGTCAG CGCCGACCAG
GCTGCAATGG GTGCCAACGG GCAGATCGTG CTCAAGGCCA GCGGCGACCT GCTGCTCGAA
GCCGGCAGCC TGACCAGCGC GAGCGGCGCC GGTGACAGCA CCGGCGGCAC GATCCACCTT
TTGGGCGAGC GCGTGGGCCT GACGGGCAAC GCCCGCGTGG ACGCCAGCGG CCAGGCCGGC
GGCGGCACCG TGCTGATCGG CGGCGACTAC CGCGGCCAGA ACCCGGCCAT CGCCAACGCG
AAGCAGGTCT ACGTCTCGGG CGGTGCCACC ATCCGCGCCG ACGCCCTGGC GTCGGGCAAC
GGCGGCAAGG TGATCGCCTG GTCCGACGGC ACGACACGCG TTTATGGCAG CATCAGCGCC
CGCGGCGGTG CGCAATCGGG CAACGGCGGC TTCGTCGAAA CATCGGGCCA CACGCTGGAC
ATGCGGGGCC GGGTCGATAC GCGCGCGCCG AACGGCCGCA CCGGCACGCT GCTGCTGGAC
CCGACCAACC TCTACATCGC GAACGACCAG GCCAGCGCCG CCAGCGCGGG CATGACGGGC
AGCGACACTT CAGCCGAAAC CTTTGTCGCT TCTGGCCCCG TGAGCGATTC GCTCCTGACC
GTCGCCACCC TGGAGGCTGC GCTTGCAAAC AACATGGTGA CCGTGACCAC CGACAACGCA
TCGGGAACGG GCGCCGGCAT GATTCACGTG GTCAACCCCG TGACGTGGGC CAGCGACACG
GGCCTGACGC TGCATGCCAA CGCGGGCATC GAGATCAACG CGGCCCTCAC TGGCGGGCGC
GGCAGCCGGC TGGAGCTGTA CACGGCTTCG GGCAACATCA ACCAGACGGC GCCCCTCAGC
GTGGTCGCAC TGTCGGCCCG CGCCGACAAC GGCTCGGTCA ATCTCACCCA TCGGGACAAC
CAGGTTGAGC GACTGGCCGG TTTTGCCAAC GGGGCCGGCG GATTCAACTA CCGCGGCAAC
GGCACGCCGC TGGTCATCGG CATGGCCGGC CCTGAAGACG GCATCACTTC GCTGGGCAGC
GGACCCATCA ACGTCGCTGT CACAGGCGAC CTCACACTGC AAAGCCCGGT CAGCTCGCAG
GCGGGCGACA TCGTTCTGGC CGCCGGCAAC TTTGACAACC AGTCCACCGT GGACTCGGTC
AGCGGCCGCG TGACGGTGCA GGGCGCCGTG CTGCGTCCTT CGCTGGCCGA CTGCATCGCC
AACACGGCGC TGGCCGGCTG CACGGCCGTG CTGCCCATCC TGGCGGCCTG CCAGGCAGAT
CCGGCCATTC CCGGCTGCTC GGCTGTGCTG CCACCCCCCA CGCTGGACGC CTGCATCGCC
GCCCCGGCCA CAAGCGGTTG CGCTGCGGTG CTGCCAACGC TGACCCAATG CACGATCGCA
CCTTCGACGG CCGGCTGCTC GGTGGTGTTG CCGACCTTGG CCTCATGCAT TGCCTCACCG
ACGCTTGCGG GCTGCGCTGC GGTGCTGCCT ACGCTGGCTC AATGCGTCGC CTCGCCGGCG
CTTGCGGGTT GCGCTGCGGT GCTGCCCACG CTGAGTCAAT GCATCGCCTC GCCGGCGCTT
GCGGGCTGCG CTGCGGTGCT GCCTACGCTG AGCCAGTGCA CCATTACACC TTTGACAGCG
GGGTGCTCGG TGGTGCTGCC GTCCCTGAAC GCATGCGTCG CCTCGCCGGC GCTTGCGGGC
TGCGCTGCGG TGCTGCCCGC GCTGAGCCAA TGCATCGCCT CGCCGGCGCT CGCGGGCTGC
ACTACGGTGC TGCCCACGCT GGCCCAATGC GTCGCCTCGC CGGCGCTTGC GGGCTGCGCT
GCGGTGCTGC CCAGGCTGAG TCAATGCGTC GCCTCGCCGA CGCTTGCGGG CTGCTCGGTG
GTGCTGCCGA CACTGGCTCA GTGCACGGCC TCTCCTACCT TGCAGGGCTG CTCGGCCGTG
CTGCCGCCAG CGTCTATCTG TGTCAGCAAC CCTGCCAGCC CGGGTTGCGC GGTCGTGGTG
CCGCCTGTCC AGATCGGCGC CAACTCACCT GTGGACCAGG CTTTGAATGC GACGATCAAC
ATCATCAACA CCAGCGGCAA CGGCACTGCG CTGCTGACCC AGCTATTCAC TCAGCCAAAT
GATGCCAGGG GCACAGCAGA TGCGTCAATC AAGAAAACAT TTTGCAACTG A
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| Protein sequence | MKTTHAIIAG ALLATAVMLA GGASAQTVVN GQASFQQIGN VRTITNTPGT IIQWPGFSIG
AGEVTRFVQQ NAASAVLNRI TGQEPSLILG ALQSNGRVFL VNPNGVLFGA GSRVDVNGLV
ASSLTISNSD FLAGKMNFSA GAVAGHVVNQ GSISTPGGGQ VILIAPQVGN SGLIHSPGGE
VVLAAGRSVK LADSQNPALH VVVSAPQDQA VNLGQIVAQS GRIGIFGNLV NQRGLVSADQ
AAMGANGQIV LKASGDLLLE AGSLTSASGA GDSTGGTIHL LGERVGLTGN ARVDASGQAG
GGTVLIGGDY RGQNPAIANA KQVYVSGGAT IRADALASGN GGKVIAWSDG TTRVYGSISA
RGGAQSGNGG FVETSGHTLD MRGRVDTRAP NGRTGTLLLD PTNLYIANDQ ASAASAGMTG
SDTSAETFVA SGPVSDSLLT VATLEAALAN NMVTVTTDNA SGTGAGMIHV VNPVTWASDT
GLTLHANAGI EINAALTGGR GSRLELYTAS GNINQTAPLS VVALSARADN GSVNLTHRDN
QVERLAGFAN GAGGFNYRGN GTPLVIGMAG PEDGITSLGS GPINVAVTGD LTLQSPVSSQ
AGDIVLAAGN FDNQSTVDSV SGRVTVQGAV LRPSLADCIA NTALAGCTAV LPILAACQAD
PAIPGCSAVL PPPTLDACIA APATSGCAAV LPTLTQCTIA PSTAGCSVVL PTLASCIASP
TLAGCAAVLP TLAQCVASPA LAGCAAVLPT LSQCIASPAL AGCAAVLPTL SQCTITPLTA
GCSVVLPSLN ACVASPALAG CAAVLPALSQ CIASPALAGC TTVLPTLAQC VASPALAGCA
AVLPRLSQCV ASPTLAGCSV VLPTLAQCTA SPTLQGCSAV LPPASICVSN PASPGCAVVV
PPVQIGANSP VDQALNATIN IINTSGNGTA LLTQLFTQPN DARGTADASI KKTFCN
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