| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4007 |
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| Symbol | |
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| ID | 4686318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4271140 |
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| End bp | 4272414 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639837021 |
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| Product | cytosine deaminase |
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| Protein accession | YP_984220 |
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| Protein GI | 121606891 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0483296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATC TACTCGTCAA AAACGCCAGC CTGCCCGATG GCCGGACCGG CATCTCAATG
GCCGTGCAGG ATGGCCTCAT CACCGAGGTC GCGCCCGGCC TGGACGCCCC GGCGCACGAG
GTCATCGACG CGCGGGGCTA CTTGCTGAGC CCGCCCTTCG TCGATGCCCA TTTCCACATG
GACGCGACCC TGAGCTACGG CCTGCCGCGC GTCAACGAAA GCGGCACGCT GCTCGAAGGC
ATCGCGCTGT GGGGCGAACT CAAACCCCTG CTGACAGCCG ACGCCATCAT CGAGCGCGCC
CTCGCCTACT GCGACTGGGC CGTCGCCAAG GGCCTGCTGG CGATTCGCAG CCATGTCGAT
ACCAGCGACC CCAGCCTGCT GCCGGTCGAG GCGCTGCTGG AGGTCAAGCG CCGCGTGGCG
CCCTACATCG ACCTGCAGCT GGTCGCCTTT CCGCAAGACG GCGTGCTGCG CTCCAAAGGC
GGCATGGAGA ACCTGAAACG CGCACTGGAC CTGGGCGTGG ACGTGGTCGG CGGCATCCCG
CACTTCGAGC GCACCCTGGC CGAAGGCGCG GCCAGCGTCA GGCTGCTGTG CGAAATCGCG
GCCGAGCGCG GCAAGCTGGT GGACATGCAT TGCGACGAGA GCGACGACCC GCTGTCGCGC
CACATCGAGA CGCTGGCCTT CGAGGCGCAA CGCCTGGGAT TGCAAGGCCG CGTCAACGGC
TCGCACTGCA CGTCGATGCA TTCGATGGAC AACTACTACG TCAGCAAGCT GCTGCCCTTG
ATTGCCGAAA GCGGCGTCAG CGTCATCGCC AACCCGCTGA TCAACATCAC GCTGCAGGGC
CGGCACGACA GCTACCCGAA ACGGCGTGGC ATGACCCGCA TTCCCGAGTT GCTGGCCGCC
GGCGTGAATG TCGCCTTCGG CCACGACTGC GTGATGGACC CGTGGTACGG CATGGGCAGC
GGCGACATGC TCGAAGTCGC GCACATGGGC CTGCATGTCG CGCAGATGAC CAGCCAGCAA
GGCATTCGCG CCTGCTTCGA CGCGGTGACG GTGAATGCGG CGAAGGTGAT GCACCTGAAG
GGCTACGGCC TGGCGCCGGG CTGCGACGCG AGCTTCGTGC TGCTGCAGGC GCGCGATGCG
GTGGAGGCGA TTCGTTTAAG GGCTAATCGG TTGAAGGTTT GGAGGAAGGG GACGCTGGTG
GCGGAGACGC CGGAGGTGGT GGCTCGGTTG CAGGTGGCAG GGCGGCCGGA AAAAATTAGC
TTCTCGCATC CATAA
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| Protein sequence | MLDLLVKNAS LPDGRTGISM AVQDGLITEV APGLDAPAHE VIDARGYLLS PPFVDAHFHM
DATLSYGLPR VNESGTLLEG IALWGELKPL LTADAIIERA LAYCDWAVAK GLLAIRSHVD
TSDPSLLPVE ALLEVKRRVA PYIDLQLVAF PQDGVLRSKG GMENLKRALD LGVDVVGGIP
HFERTLAEGA ASVRLLCEIA AERGKLVDMH CDESDDPLSR HIETLAFEAQ RLGLQGRVNG
SHCTSMHSMD NYYVSKLLPL IAESGVSVIA NPLINITLQG RHDSYPKRRG MTRIPELLAA
GVNVAFGHDC VMDPWYGMGS GDMLEVAHMG LHVAQMTSQQ GIRACFDAVT VNAAKVMHLK
GYGLAPGCDA SFVLLQARDA VEAIRLRANR LKVWRKGTLV AETPEVVARL QVAGRPEKIS
FSHP
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