| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4004 |
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| Symbol | |
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| ID | 4686400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4268421 |
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| End bp | 4269308 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837018 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_984217 |
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| Protein GI | 121606888 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.242655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCA CCATTGAAGA ACTCCTGGCC TTTCGCACCG TGGTGGACAG CGGCACCATC
ACCGCCGCCG CCGACCAGCT GGGGCAAACC GTTTCGGGCA TCAGCCGGGC GCTGGGCCGG
CTGGAGAAAA AGCTCGGCAC CACGCTGCTG CGCCGCACTA CGCGGCGGCT GGAGCTGACC
GAAGAGGGGC AAATATTCCT GCTGCGCAGC CGCGCCATCC TGGGCGCGCT GGACGCGGCC
GAGGACGAGC TGGCGGCGCG GCGGCAGGCG CCTGCCGGCC TGCTGCGGGT CAATGCCGCC
ACACCCTTCA TGCTGCACGC CATCGTGCCG CTGGTGCCCG AGTTCAGCCG GCTGTTTCCC
AGGATCAGCC TGGAGCTGAA CACCGACGAC CTCAACGTGG ACCTGCTGGC GCAGCGCACC
GACATCGCCA TCCGCATCGG CGAGCTGCGC GACTCCACGC TGCATGCCCG GCCGCTGGGC
GCCAGCCGGC TGCGCGTGTT GGCCAGCCCG GCCTACCTGG CGGCGCACGG CCGGCCCAAG
TGCGTGGCCG ATCTGGCAAG CCATCAGCGC ATCGGCAACA GCCAGCTGTC GTCCCTCAAC
CAGTGGCCGC TGCGCGGGCC GCACGGCGAC AGCTATGCCG CCGCGCCGAC CCTGAGCGCC
TCCAGCGGCG AAACCATGCG CCACCTGGCG CTGGCCGGCA TGGGCGTGGT CTGCCTGGCC
GACTTCATGA CCGAAACCGA CCGCCAGCGC GGCGACCTGG TCCAGCTGCT GGCACGCGAG
ACGGTCGAGA GCCGGCAGCC GGTCAACGCC GTGTACTACC GCAACACCGC GCTGTCGTCG
CGCATCACGG CCTTCCTGGA TTTCATCGCG GCGCGGATGC CGCCTTGA
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| Protein sequence | MQITIEELLA FRTVVDSGTI TAAADQLGQT VSGISRALGR LEKKLGTTLL RRTTRRLELT
EEGQIFLLRS RAILGALDAA EDELAARRQA PAGLLRVNAA TPFMLHAIVP LVPEFSRLFP
RISLELNTDD LNVDLLAQRT DIAIRIGELR DSTLHARPLG ASRLRVLASP AYLAAHGRPK
CVADLASHQR IGNSQLSSLN QWPLRGPHGD SYAAAPTLSA SSGETMRHLA LAGMGVVCLA
DFMTETDRQR GDLVQLLARE TVESRQPVNA VYYRNTALSS RITAFLDFIA ARMPP
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