Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4001 |
Symbol | |
ID | 4686480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4264289 |
End bp | 4266526 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639837015 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_984214 |
Protein GI | 121606885 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.703594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT GCTGCAACCA ACCCTCTCAC ACGTCCGCCA TTGCCGACCT TCCGGCCGCG CCTGTTCCCG CCGGCGCCAC GCGCTTTCGC ATCCCGGCGA TGGACTGCGC GGTTGAAGAG GCCGACATCC GGCGCGTGCT GGCCGGCGTG CCGGGCATCC GCTCGCTCAA CTTTCAGCTG GTGGCGCGCA CGCTGACGAT TGATGCGCAG GCCGAAGCCC TTCAGGCGGC GGTCAGCGCG ATAGGCCAGG CGGGCTACAA GATGCAGCCG TTTACCGACG CCGGGCCAGC CGGCCAAACC CATGGTGCGC ACGACCATGA GCACGATCAC GCGCACGGCC ACGGCGGCCT GCCCTCGGGC CTGCCGCGCC TGGCGGGCGC GCTGGGGCTG GCCGGGGTGG CCGAGGTGAT CAGCTTTTTC GCCCCCGCCG GCCTGCCCTG GACGCTGGCC GGCATGGCGG TGGCGCTGGC CGCCATCTTC ATGGCCGGGC TGGAGGTGTA CCAGAAAGGC CTCACGGCCT TGTTCAGGCG CCGGCTCAAC ATCAATGCGC TGATGACGGT GGCCGTCACC GGCGCCTTCC TGATCGGCCA GTGGCCCGAG GCGGCCATGG TGATGGCGCT GTATTCCATC GCCGAGCTGA TCGAGGCCAT GGCGGTGGAC CGCGCGCGCA ATGCCATCAA GGGCCTGATG GCACTGGCGC CCGAAGCCGC CGAGCTTCGC CAGCCGGACG GCCAGTGGAC CAGCGTGCCG CTCAATGACG TGCCGCTGGG CGCCACGGTG CGCGTGCGGC CCGGCGGGCG CATTCCGCTG GACGGCCTGG TCATGGCCGG CGCCAGCGCG GTTGATCAGG CGTCGGTCAC AGGGGAAAGC CTGCCGGTGG ACAAGGCGGC GGGCGACAGC GTGTTCGGCG GCACCATCAG CCAGACCGGC GCGCTGGAGC TGCGGGTCAC GGCGGCCGCC AGCGACAGCA CGCTGGCGCG CATCATCCAC GCCGTCGAGC AGGCGCAGGG CGCGCGCGCG CCCACGCAGA CCTTCATCGA CCGCTTCGCC GCCATCTACA CGCCGGCGGT GTTCATGCTG GCGCTGGCCG TGGCCGTCCT GACGCCGCTG CTGCTTGACT GGACCTGGCT GGAGGCGCTG TACAAGGCGC TGGTGCTGCT GGTGATTGCC TGCCCGTGCG CGCTGGTGGT GTCCACGCCG GTCACGGTCG TCAGCGGCCT GACCACGGCG GCGCGGCGCG GCATCTTGAT CAAGGGCGGC ACCTACCTCG AAGACGCCCG GCGGCTGAAG GCCGTGGCGC TGGACAAGAC CGGCACCATC ACCCAAGGCA AGCCGGTGCT GGTGGCCTGG CAGGCATGGG GCGGCGCGGA TCAGGCCGAA GTCGGCCGCC TGGCGGCCAC GCTGGCGGCG CGCTCCGACC ATCCGGTGTC CAGCGCCATC GCGCAGGGGC TGCGGGCCGG CAACCCGCAA GGCGCCCTGC CGGCAGGGGC AGTTGAGGCG GTCGAGATGC TTGAGGCGCT GTCGGGGCGG GGCGTCCAGG GCCGGATCGG TGGACAACCG TACGCGCTGG GCAACCACCG GCTGATGGAG GAGCGCCAGC AATGCTCGCC CGCGCTGGAA GCGGCGCTGG CCCTGCACGA GCAGCAGGGC CGCACGGTCA CGCTGCTGGC CAGCGCGCAG GGCGTGCTGG GAATCTTCGC GGTGGCCGAC ACCATCAAGG AAAGCTCGCG CCAGGCGATT GCCGAGCTGA AGGCGCTGGG CGTGACGCCC GTCATGCTCA GCGGCGACAA CGCCGCCACG GCCAGCGCGG TGGCGGCGCA GGCCGGCATC ATTGACGTGC GCGGCAACCT GCTGCCCGAG GAAAAACTGG CCGCCATCCG GCAGCTGCAA GGCCAGTACG GCGCGACCGG CATGATCGGC GACGGCATCA ACGACGCGCC CGCGCTGGCG CAGGCCGACA TCGGTTTTGC CATGGGCGGC GCGGGCACCG ACATTGCCAT CGAGGCGGCC GACGTGGTCA TCATGAACGA CAACCTGCGG CGCATCGCCG AGACGGTGCG CCTGTCGCGG CGCACGCATG CCGTGCTGTG GCAAAACATC GCGCTGGCCC TGGGCATCAA GGCGGTGTTT TTCGTGCTGG CCGTGTTCGG CAGCGCGACC ATGTGGATGG CTGTGTTCGC CGACATGGGC GCCAGCCTGC TGGTGGTGGC CAACGGCCTG CGGCTGCTGC GCCGCTAG
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Protein sequence | MTDCCNQPSH TSAIADLPAA PVPAGATRFR IPAMDCAVEE ADIRRVLAGV PGIRSLNFQL VARTLTIDAQ AEALQAAVSA IGQAGYKMQP FTDAGPAGQT HGAHDHEHDH AHGHGGLPSG LPRLAGALGL AGVAEVISFF APAGLPWTLA GMAVALAAIF MAGLEVYQKG LTALFRRRLN INALMTVAVT GAFLIGQWPE AAMVMALYSI AELIEAMAVD RARNAIKGLM ALAPEAAELR QPDGQWTSVP LNDVPLGATV RVRPGGRIPL DGLVMAGASA VDQASVTGES LPVDKAAGDS VFGGTISQTG ALELRVTAAA SDSTLARIIH AVEQAQGARA PTQTFIDRFA AIYTPAVFML ALAVAVLTPL LLDWTWLEAL YKALVLLVIA CPCALVVSTP VTVVSGLTTA ARRGILIKGG TYLEDARRLK AVALDKTGTI TQGKPVLVAW QAWGGADQAE VGRLAATLAA RSDHPVSSAI AQGLRAGNPQ GALPAGAVEA VEMLEALSGR GVQGRIGGQP YALGNHRLME ERQQCSPALE AALALHEQQG RTVTLLASAQ GVLGIFAVAD TIKESSRQAI AELKALGVTP VMLSGDNAAT ASAVAAQAGI IDVRGNLLPE EKLAAIRQLQ GQYGATGMIG DGINDAPALA QADIGFAMGG AGTDIAIEAA DVVIMNDNLR RIAETVRLSR RTHAVLWQNI ALALGIKAVF FVLAVFGSAT MWMAVFADMG ASLLVVANGL RLLRR
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