| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3990 |
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| Symbol | |
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| ID | 4686241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4257077 |
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| End bp | 4257973 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837006 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_984205 |
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| Protein GI | 121606876 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.550501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.577869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGTT TTCATGCCAT GCGGCTGTTC ACCCGCATCG TCGAGCTGGG CAGCTTCACC
AAGGCGGCCG ACGACCTGCA GCTGCCGCGC GCCACCGTGA CGCATGCCGT GCAGCAACTC
GAAAAACGCC TGGGCACCCG GCTGCTGCAC CGCACGACGC GGCAGGTCAG CGCCAGCCAG
GACGGCCAGG CCTATTACGA GCGCTGCCGG CGCCTTCTGG CCGACCTCGA AGAAGCCGAA
ACGGCCTTTG CCAACAGCGC CGCCCAGCCC AAAGGCAAGC TGCGCGTTGA CCTGCAGGGC
ACGCTGGCCA AGCACTTCGT GCTGCCGGTG ATCGCCGATT TTTTTGCGCG CTACCCCGGC
ATCGAGCTGG AAATCGGCAT GGGCGACCGC TTCGTGGACC TGGTGCGCGA AGGCGTGGAC
TGCGTGCTGC GGGCTGGCGA ACTCAGCGAC TCCAGCATGG TGGCGCGACG CGTGGCCCGG
CTGCGGCAGG TCACCTGCGC CAGCCGCGAC TACCTGGCCA GGCACGGCAC GCCGGACACC
GTCGAGGCCT TGCGCGGCCA CCAGGCGGTG AATTTTTTAT CGCCCCAGGA CGGCAGGCCA
CTGCCTTTTG AATTCCTCAT CAATGGCGCG GTGCGCAGCC TGCAGCTGCA GGGCCAGGTG
GCGGTGAGCG ATGCCGATGC CTACGTGGCC TGCTGCGCGG CGCATCTGGG CCTGATCCAG
TTGCCGCGCT ACCACGTTGC AGCACGGCTG GACAGCGGCT GCTTTGTCGA AGTGCTGGCG
CCGTGGCGCC CTGCGCCCAT GCCGGTGTCG GTGCTGTACC CGCAGCACCG CCAACTGTCG
CCACGGGTGC GTGTCTTTGT CGATTGGCTG GTTGAGGTGA TGGGGCAAGC CGGCTGA
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| Protein sequence | MDRFHAMRLF TRIVELGSFT KAADDLQLPR ATVTHAVQQL EKRLGTRLLH RTTRQVSASQ
DGQAYYERCR RLLADLEEAE TAFANSAAQP KGKLRVDLQG TLAKHFVLPV IADFFARYPG
IELEIGMGDR FVDLVREGVD CVLRAGELSD SSMVARRVAR LRQVTCASRD YLARHGTPDT
VEALRGHQAV NFLSPQDGRP LPFEFLINGA VRSLQLQGQV AVSDADAYVA CCAAHLGLIQ
LPRYHVAARL DSGCFVEVLA PWRPAPMPVS VLYPQHRQLS PRVRVFVDWL VEVMGQAG
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