| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3989 |
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| Symbol | |
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| ID | 4686673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4256132 |
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| End bp | 4256914 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837005 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_984204 |
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| Protein GI | 121606875 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.673066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.302564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT CCAGCACCCG CCACCCCGCC AGCGACCCAT CCATTGCGGT GGCCCAGGTC
GCCATCGTCA CCGGCGCCTC GCGCGGCATC GGCGCGGCCA TTGCCCGGCG CCTGGCGCGC
GGCGGTTATG CGGTGGTCGT CAACTACGCC GGCAAGGCCG CCGAAGCCCG CGCCGTCGTG
CAGGCCATCG AATCGGCCGG CGGCCAGGCG CTGGCGGTGC AGGCCGACGT GTCGGACGCC
GCCGCCGTGC GCGCCCTGTT CGACCAGGCC ATCGAGGCCT TCGGCCGCGT CGATGTGCTG
GTCAACAACG CCGGCATCAT GCCGCCAGCG CTGCCGCATC TGGCCGACAC CGACGACGCG
ACGTTCGAGC GCCTGTTCGC CGTCAACGTC AGGGGCACCT TCAACACCCT GCGCGAAGCC
GCCGCGCGCC TGCAGCACGG CGGGCGCATC GTCAACTTTT CCAGCAGCGT GATCGGCCTG
GCACTGCCAG GCTACGCGGT GTACGCCGCC ACCAAGAGCG CGGTCGAAAC CTTCACCCAC
ATCATGGCCA AGGAGCTGCG CGGCAAGAAC ATCCGCATCA ATGCGGTCGC GCCCGGCCCG
ACCGCCACGG ACCTGTTCCT GAACGGCAAG ACCCCCGAAA CGGTTGAGCG CCTGTCGAAA
ATGGCGCCGC TGGAACGCCT GGGCACGCCT GGGGACATCG CCGCTGCGGT CGCTTTTTTG
GTCAGCGAAG ACGCCGGCTG GGTCAACGGC CAGACGCTGC GCGCCAATGG CGGGGTGGTT
TAA
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| Protein sequence | MTASSTRHPA SDPSIAVAQV AIVTGASRGI GAAIARRLAR GGYAVVVNYA GKAAEARAVV
QAIESAGGQA LAVQADVSDA AAVRALFDQA IEAFGRVDVL VNNAGIMPPA LPHLADTDDA
TFERLFAVNV RGTFNTLREA AARLQHGGRI VNFSSSVIGL ALPGYAVYAA TKSAVETFTH
IMAKELRGKN IRINAVAPGP TATDLFLNGK TPETVERLSK MAPLERLGTP GDIAAAVAFL
VSEDAGWVNG QTLRANGGVV
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