Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3987 |
Symbol | |
ID | 4686691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4252471 |
End bp | 4254627 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639837003 |
Product | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane |
Protein accession | YP_984202 |
Protein GI | 121606873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0395504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.53474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAC GAATAAATCA ACATCAAAAG GACGACATGA CCATCATCAT TGCAGGCAAA AACACCTTGA CGCTCACCTC GCTGGCCGCT GCCGTACTGG CGCTCGGCGC CTGCGGCGGG AACAGTGATC CTTTCGAAAG CAAAAACACC AAGCCGGCCT ACCTGGGCGC CGTCGCCATC GCCAGCTACG ACGGCGCCAG CGACGACCTG CTCACCGCCG GCCTCGGCAA GACCGGCCTG GGCGGGACCG CGCCGGCCGT GGCCGACCCG CTGAAGCCGA CCCCCGCCGA ACTGCGCCGG CTGGCGATTT TCAACAACTA CCGCGCCATC CTCGACATCA GCACGAACGG CGGCTACGGC ACGCTGTATG GCCCGAACGT CGATGCCAAG GGCGTCATCA CCACCGGCGA AGGCAAGATC GCCGGGACCG AATACATCGC CTACTCCGAC GACGGCACGG GCAGGCAGAA CATCACCATG ATGGTGCAGG TGCCGGCCAG CTTCAACCCG GCCAATGCCT GCATCGTGAC CGGCACCTCC AGCGGCTCGC GCGGCGTGTA CGGCGCCATC GGCTCGGCCG GCGAGTGGGG CCTGAAAAAC GGCTGCGCCG TGGCCTACAC CGACAAGGGC ACGGGCACCG GCATCCACGA CCTGCAGAAC AACACCGTCA ACGTGCAAAA CGGCGTTCGC ACCGACGCCG CTGCCGCCGG AAAAAACTCG ATCTTCACCG CCGAACTGAG CGCCTCCGAG CGGGCCGCCT TCAACGCGGC CACGCCGAAC CGCTTTGCCG TCAAGCATGC GCATTCGCAG CAGAATCCTG AAAAGGACTG GGGCAAATGG ACGCTGCAAT CGGTCGAGTT CGCCTATTTC GTGCTGAATG AAAAATACGG CGACCTGGCC CGGGACGGCG CGACGCACCT GAAAAAGCTC ACGCCGTCGA ACACCATCGT GATCGCCTCC AGCGTGTCCA ACGGCGCCGG CGCGGCGCTG GCGGCGGCAG AGCAGGACAC GCAGGGCCTG ATCAGCGGCG TGGCGGTGGC CGAGCCCGAA GTGCAACTGG CGCCCGACGC CCGCCTGAGC GTCAAGCGCG GCGCCAGCGT GCTGGTCGGC ACCGGCAAGC CGCTATATGA CTATTTCACG CTGGCCAATT TGCTGCAGCC TTGCGCGGCG CTGGTGTCTC CCGCCACGAA CGCCTTCAAC ACGGTCAACG CGGCGACTGC CACCAACCGC TGCAGCGCCC TCAAGGCCAA CGGCCTGGTC ACCGGCACCA CGACCGCCGA ACAGGCCGCC AGCGCGCTGG CCGCGCTGGT CGCGGCGGGC TGGCAGCCGG AAAGCAATGT GCTGCAGGCC TCGCACTACT CGTTTGCAAC GCTGTCGGTC GGGCTGACGT ATGCCAACAC CTATGGCCGC TTCAGCGTCA AGGACAACCT GTGCGGCTTC AGCTTCGCGG CCACCGGCGC CGCCGCATCG GCGACGCCGA ACGCCCCGGT TCCGGCTTCC GCCAGCGCGC TGGCGACCTC GTTCGGCGCG TCCAACGGCG TGCCGCCGAC CATCGGCATC AACATCGTCA ACAACCTCAG CGCGGGCGGA CCCTTGCTCG ATGCCGCCTC GCTGTCGGCC GGCGGTGTGC AGGACTACAA CATCGCCGGC GCGCTGTGCA TGCGCGAGCT GGCTACCGGA AGCAGCGCCA ACGCCGTGCG CGTCAGGCAG GGCATGAGCG AAGTGGTGCG CAGCGCCAAC CTGCGCGGCA AGCCGGCGCT GATCGTGCAG GGCCGGGCCG ACACGCTGCT GCCGGTGGCC TTCACCGGCC GGCCTTACTA CGGCATGAAC AAGATCGTCG AAGGCACGGC TAGCCGGCTG TCGTACATCG AGGTGACCAA TGCCCAGCAT TTCGACGCCT TCCTCGCCTT CCCGGGCTAT CCGGAACGCA TGGTGCCGCT GCACCGCTAC TTCATCCAGG CGATGGACAT GATGTATGCC AACCTGAAGA CCGGCGCCGC CCTGCCGGCC AGCCAGGTAG TGCGCACCGT GCCGCGCGGC CTGACGGGCG CCGTGGCCAA TCCGATTGCC GCCAGCAATG TGCCGCCGAT CAAGACGACG CCCGCCGCCG CTGACCAGAT CACCTTCGCC AACAACGTGG TGACCATCGC CGACTGA
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Protein sequence | MNQRINQHQK DDMTIIIAGK NTLTLTSLAA AVLALGACGG NSDPFESKNT KPAYLGAVAI ASYDGASDDL LTAGLGKTGL GGTAPAVADP LKPTPAELRR LAIFNNYRAI LDISTNGGYG TLYGPNVDAK GVITTGEGKI AGTEYIAYSD DGTGRQNITM MVQVPASFNP ANACIVTGTS SGSRGVYGAI GSAGEWGLKN GCAVAYTDKG TGTGIHDLQN NTVNVQNGVR TDAAAAGKNS IFTAELSASE RAAFNAATPN RFAVKHAHSQ QNPEKDWGKW TLQSVEFAYF VLNEKYGDLA RDGATHLKKL TPSNTIVIAS SVSNGAGAAL AAAEQDTQGL ISGVAVAEPE VQLAPDARLS VKRGASVLVG TGKPLYDYFT LANLLQPCAA LVSPATNAFN TVNAATATNR CSALKANGLV TGTTTAEQAA SALAALVAAG WQPESNVLQA SHYSFATLSV GLTYANTYGR FSVKDNLCGF SFAATGAAAS ATPNAPVPAS ASALATSFGA SNGVPPTIGI NIVNNLSAGG PLLDAASLSA GGVQDYNIAG ALCMRELATG SSANAVRVRQ GMSEVVRSAN LRGKPALIVQ GRADTLLPVA FTGRPYYGMN KIVEGTASRL SYIEVTNAQH FDAFLAFPGY PERMVPLHRY FIQAMDMMYA NLKTGAALPA SQVVRTVPRG LTGAVANPIA ASNVPPIKTT PAAADQITFA NNVVTIAD
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