Gene Pnap_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3985 
Symbol 
ID4687276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4250533 
End bp4251171 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID639837001 
Productmethyltransferase type 11 
Protein accessionYP_984200 
Protein GI121606871 
COG category[I] Lipid transport and metabolism 
COG ID[COG3963] Phospholipid N-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.349003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.591625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC CACATGTTGA AAGGCCGATG AGCCATCCAA CCCTGCCTGC AGGCCCTCTC 
AACTTTCGCC AGTTGCGCGA CAACTACCAG TTCCTTCGCG GCTTTGTACG CAATCCGGCC
CGTGTCGGCT CCATCGTTCC GAGTTCCCAC CAGCTTGAGC AGCGCCTGGT GCAGCTTGCC
CGGCTTGGCG AGGCGCGCAT GGTGGTCGAG CTGGGGCCGG GCACCGGCGG AACGACCGCC
GCCTTTTTGC AGGCGATGTC TCCCACGGCC CAGTTGCTGG CCATCGAACT CGACAGCGAA
TTCCACCAGC GCCTGGACGC CGCCATGCAT GACCCGCGCT TTAACCTTGA GCTGGGCAGC
GCCGAGCGCC TGGCCGAATT CCTGGCGGCC CGCTGGCTGC CGGCGCCCGA TGCCATCGTC
TCCGGCATTC CGTTTTCAAC CATGGCGCCT GAAGTCTCCG ACCGGGTGGC GGCCACCGTC
GCCCGGGTGC TGCGGCCGGG CGGGCGTTTT GTCGCCTACC AGGTGCGCGC GCATGTCGCC
GATTTCATGT CGCCCTACCT CGGCCAGCCC GAGACCTGCT GGGAATTCAT GAACGTGCCG
CCAGTGCGGG TCTTCACCTG GGTCAAGCCC GGGCGCTGA
 
Protein sequence
MNQPHVERPM SHPTLPAGPL NFRQLRDNYQ FLRGFVRNPA RVGSIVPSSH QLEQRLVQLA 
RLGEARMVVE LGPGTGGTTA AFLQAMSPTA QLLAIELDSE FHQRLDAAMH DPRFNLELGS
AERLAEFLAA RWLPAPDAIV SGIPFSTMAP EVSDRVAATV ARVLRPGGRF VAYQVRAHVA
DFMSPYLGQP ETCWEFMNVP PVRVFTWVKP GR