| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3983 |
|---|
| Symbol | |
|---|
| ID | 4687165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4249222 |
|---|
| End bp | 4249641 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639836999 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_984198 |
|---|
| Protein GI | 121606869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3607] Predicted lactoylglutathione lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.286993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTC AGATCTACGT CAACCTGCCG GTCAAGAACC TGGACAAGTC GCTGCGATTT
TTCAAGCGGC TCGGCTTCGC GTTCAACCCC AGGTTCACCG ACGAGAACGC CGCCTGCATG
ATCGTGAGCG ACGACAGTTA CGTGATGCTG CTGGTCGAGG ATTTTTTCAA GACCTTCACG
CCGCATCCGA TCTGCGACGC CACCCGCAGC ACCGAGGTCA TCGTCTGCCT GTCCTGCGAA
AGCCGGGAGG CGGTGGACCT GATGGTGAGC AATGCGCTGG GCGCAGGCGC AAGGATGCAC
CGCGCGGCCA AGGACCACGG CAATATGTAC CAGCACGGCT TCCTGGACCT GGACGGCCAC
CTGTGGGAAG TGATGTACAT GGAGCCGACC TACGTGCAAA TCGGCCCCGA AGACGTTTAA
|
|---|
| Protein sequence | MATQIYVNLP VKNLDKSLRF FKRLGFAFNP RFTDENAACM IVSDDSYVML LVEDFFKTFT
PHPICDATRS TEVIVCLSCE SREAVDLMVS NALGAGARMH RAAKDHGNMY QHGFLDLDGH
LWEVMYMEPT YVQIGPEDV
|
|---|
| |