Gene Pnap_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3969 
Symbol 
ID4687226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4236077 
End bp4236367 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content64% 
IMG OID639836986 
Producthypothetical protein 
Protein accessionYP_984185 
Protein GI121606856 
COG category[S] Function unknown 
COG ID[COG4309] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.956951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0519683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT GCGATGCCTA CCTCACGATG GATGTCCGCC AGATTGCGCC GCCTGATCGC 
CATTCCATGA TCTTTGCGGC CTTCAAGCTG CTCGGCCCGG ACGAAATCAT GGAATTGATC
AGCGACCACG ACCCCCAACC CCTGAAGGCC CAATTCCAGT TCGAGTTGCC GGGCCAGTTT
TCCTGGGTCT ATCTGGAGCA AGGCCCGGCC ACCTGGCGCG TCGCCATCAA CCGGCTGAAG
ACCGGCCACG GCAGCGGCGG TTGCTGCGGC GGCTGTGGCG GCGGCGCCTG A
 
Protein sequence
MTACDAYLTM DVRQIAPPDR HSMIFAAFKL LGPDEIMELI SDHDPQPLKA QFQFELPGQF 
SWVYLEQGPA TWRVAINRLK TGHGSGGCCG GCGGGA