| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3961 |
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| Symbol | |
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| ID | 4686588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4225808 |
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| End bp | 4228039 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639836978 |
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| Product | regulatory protein, putative |
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| Protein accession | YP_984177 |
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| Protein GI | 121606848 |
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| COG category | [K] Transcription |
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| COG ID | [COG3901] Regulator of nitric oxide reductase transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0857472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAG GCAAACACGC CTGGACGAAC GACGGGCAGG CCAGCGGGCC GGACCCGGTT
ATGCGCAGGG TTCTGCCCGT GTTGCTGACG CTGCTGATCC TGTTCCTGCT GCCGGGCTTG
CTGCCGGCCC AAGCCGGCGT GATGACGCGC GAGGCGATGC TCAAGGCTTT TCCCGCGCCC
TTGATCGTCG GCGAGAAGGA GCGCGAGCTG CCCGTCTGGC CGATTTTGAA GCAGGACGGC
ACGGCGACGC CGGTGGTCGC CTATGTGTTC GAGTCCATCG ACCTGGCGCC GATTCCCGGC
TTTTCCGGCA CGCCGTTCAA TCTGCTGGTC GCGCTCGACG CCAAGGGCGC GTTCATGGAC
GTGCGCGTGC TCTCGCAGCA CGAGCCGGTG TTTCTCGACG GACTGGGCGA AGGGCCGATG
CTCGACTTCG TGCGCCAGTA CAAGGGCCGG TCCCTGACGC AGAACATCAA GATCGGCAAC
GGCGGCAACA CCAGCAACAA CAGCGCCAAA GCCGGCAGCG CCAACGTGTA CATCGACGGC
GTGGCCAAGG CGACGGCTTC GGTGCGCATC CTGAACCAGA GCCTGCTGTC GGCTTCGCTC
AAGGTGGCAC GGGCCAGGAT GGGCTACGCC AAGGGCCGCG ACCCCGACCT GATCGCCCGC
GTCCGGCAGG GCGTGTTCGC GGCGATGGAC TGGGATGCGC TGACCCAGGC GGGCCTCATC
ACCGCCAAGC ATTTCAGCAA CGGCGACATC GAGCAGGCCT TCAAGGGCAG CGTGGGCGAA
GGCCAGGACG CCGAAGGCCG CCGCGCGCCC GGCGAGCCTT TCATCGACCT GCACGTCGCC
TACCTGAGCG TGCCGTCCGT GGGCCGCAAC CTGCTGGACG CCCAGGGCTG GGCCTATCTG
CAGCGCCGCC TGGAGCCGGG CGACCATGCA CTGCTGGTGA TCGGCAGCGG CCGCTACTCG
TTCGTCGGCG AGGATTTTGT CCGGGGCGCG ATACCCGACC GGCTGACGCT GCAGCAGGAG
AGCCTGCCGA TGGAAATCCG CGACCTCGAC CTGGACGCCA CGCTCAAACT CCCGCCCGCG
CTGCAGGGCG CCGAGTGGCG CGTGCTGCGC ATCAACGCGC CGGCCGGGCT GGACCCGGCG
CAGGCGCTGA ACTTCAAGCT GCGCATCACG CGCAGCAAAG GCCAGATCTA CCCCGAGCAG
GTCAGCCGCG ACTTTGCCTT CAGCGCGGCG CTGCCCGAGG CCTATTTCGA GGCGGCGCAT
GCCGACAACA AGACCTGGCA CGCGACCTGG CGCGAGCGCA GCGGCGAGCT GGCGCTGCTG
CTGGCCGGGC TGGGGCTGCT GGCCTGGGCG CTGGCCCGGC CGGCCTGGGT GTCGCGCAGC
CCGGCGCGGC TGGCGTATTT CCGCACCGGC TACCTGCTGT TCACGCTGCT GTTCATCGGC
TGGTACGCGC AGGGCCAGCT CTCGGTGGTC AACCTCACGG CGCTGGTGCA GGCCTTGCTG
GCCGGGCGCA GCCTGGATTT TTTCATGTAC GACCCGATGA CGGTGGTTTT GTGGGGCGCG
GTGGCCGTGG CCTCGGTCGC CTGGGGCCGG GGCACGTTTT GCGGCTGGCT GTGTCCGTTT
GGCGCGCTGC AGGAGCTGGT CAGCAAGCTG GCCAATGCGC TCGGCCTGCG CCAGCGCAAG
GTGCCGGACC GCGTGGACGC GCAGCTCAAA AAGCTCAAGT TCGTGGTGCT GGCCGTGATT
CTGGGCGTGG CCTGCGTTTC CGTGCCCTGG GCCGACCGGC TGGTCGAGGT CGAGCCGTTC
AAGACCAGCA TCACGCTGCT GTTCAACCGC GCCTGGCCCT TCGTGCTGTG GGCCGTCGCC
CTGATCGTGA TGAGCGCCTT TTTCTACAAG AGCTACTGCC GCTACCTGTG CCCGCTGGGC
GCGGGCATGG CGGTGCTGGG GCGGCTGCGC CGCTTTGACT GGCTCACGCG CCGCGCCGAG
TGCGGCCAGC CCTGCCAGCG CTGCCGCAGC GCCTGCGCCT ACCAGGCGAT TGAAAAGCCG
GGCCAGATCG ACTACGACGA ATGCTTCCAG TGCCTGGACT GCGTGGCGAT CTACAGCAAC
GAAGACCTGT GCGTGCCGCT GATCCTGAAA AACCGCCAGC CGCCTGCGCC ACCCAAGCCC
CGTGTTCACA TCCCGATCAC CGTGCTGCGC CACGGCGAAG CGGGCAAACG CCATGAAGGA
GCCACCCCAT GA
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| Protein sequence | MTSGKHAWTN DGQASGPDPV MRRVLPVLLT LLILFLLPGL LPAQAGVMTR EAMLKAFPAP
LIVGEKEREL PVWPILKQDG TATPVVAYVF ESIDLAPIPG FSGTPFNLLV ALDAKGAFMD
VRVLSQHEPV FLDGLGEGPM LDFVRQYKGR SLTQNIKIGN GGNTSNNSAK AGSANVYIDG
VAKATASVRI LNQSLLSASL KVARARMGYA KGRDPDLIAR VRQGVFAAMD WDALTQAGLI
TAKHFSNGDI EQAFKGSVGE GQDAEGRRAP GEPFIDLHVA YLSVPSVGRN LLDAQGWAYL
QRRLEPGDHA LLVIGSGRYS FVGEDFVRGA IPDRLTLQQE SLPMEIRDLD LDATLKLPPA
LQGAEWRVLR INAPAGLDPA QALNFKLRIT RSKGQIYPEQ VSRDFAFSAA LPEAYFEAAH
ADNKTWHATW RERSGELALL LAGLGLLAWA LARPAWVSRS PARLAYFRTG YLLFTLLFIG
WYAQGQLSVV NLTALVQALL AGRSLDFFMY DPMTVVLWGA VAVASVAWGR GTFCGWLCPF
GALQELVSKL ANALGLRQRK VPDRVDAQLK KLKFVVLAVI LGVACVSVPW ADRLVEVEPF
KTSITLLFNR AWPFVLWAVA LIVMSAFFYK SYCRYLCPLG AGMAVLGRLR RFDWLTRRAE
CGQPCQRCRS ACAYQAIEKP GQIDYDECFQ CLDCVAIYSN EDLCVPLILK NRQPPAPPKP
RVHIPITVLR HGEAGKRHEG ATP
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